Defluviicoccus sp. SSA4: HWD60_00660
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Entry
HWD60_00660 CDS
T06717
Name
(GenBank) IS21 family transposase
Organism
dex
Defluviicoccus sp. SSA4
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4096
Mu-transpos_C_2
rve
rve_3
HTH_Tnp_Tc3_2
HTH_17
HTH_7
HTH_11
HTH_23
HTH_29
Sigma70_r4_2
HTH_32
Phage_NinH
HTH_38
GerE
Motif
Other DBs
NCBI-ProteinID:
QLH37803
UniProt:
A0A7D5S0Z6
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Position
123277..124968
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AA seq
563 aa
AA seq
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MANVFWLDDDAWAAIEPHLPKNQPGARRVDDRRIISGIIHVLKSGCRWRDCPPDYGPPTT
VYNRFNRWSRRDHGRRILKALAEDQWITTAVAMDGSSVKAHRCAHGGKGGEGSVGRQMKL
PPGDTKIDPLFTRGGDMTMVVDCLPVAGTAGKDRMETPEDVAAMLRLSELGXGAKRIAFT
LGCSRNTVRRYLRQGGWKAYRGAQRPGALDGLEDWLAERFRRHRGNADVIRQELAREQGI
QVSLRTVERSVRDLRRELAAEAQACVRFETPPGRQLQIDFGSISVAIGGEVVRVYLFVAT
LGYSRRGFVMAFRHERQCAWFEGIEAAFRHFGGVPSEVLLDNAKALVLHHDATTRKVVFN
ERFHSFARYWDFRPRACAPYRARTKGKDERGVGYVKRNAIAGRSFTSWAELEAHLAWWMR
DIADRRVHGTTGEPPIERFVRDEADTLRPIGGRPPFRQVREVARRVQGDGCITLDTNHYS
VPWQLIGAEVTVEQADGIVRIRHGGCEVACHPLRRGRRERAIDSAHLAGIVAGGGPRPVP
PAPEGCALLRPLAEYEAVAGGGW
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgtgttctggctggacgacgacgcatgggcggcgatcgagccgcatctgccg
aagaaccagccgggagcacggcgggtggatgatcgtcgcattatcagcgggatcatccat
gttctgaagagtgggtgccgctggcgggattgtccgccggactacggtccaccaacaacg
gtctacaaccgtttcaaccgctggtcccgccgggatcacgggcgccggatcctcaaggcg
ctggccgaggaccagtggatcaccaccgcggtggccatggacggcagttctgtgaaagcg
caccgctgcgctcacggcggaaaagggggcgaaggctctgttggccgacagatgaaactg
ccccctggcgacacgaaaattgaccccctgttcacgagaggtggggacatgacgatggtg
gtggattgtcttcccgtagcagggactgcggggaaagatcggatggaaacgccggaggat
gtggcggcgatgctgcggctttcggagctgggctgnggggcgaagcggatcgcgttcacg
ctcggctgcagccggaacacggtccgcagatatttgcgccagggcggctggaaggcgtat
cgcggcgcccagcggccgggtgcgcttgacgggctggaagattggttggccgagcggttt
cgccggcaccggggcaacgcggacgtcattcgtcaggaactcgcgcgggagcaaggaatt
caggtcagcctgcgcacggtggaacggtcggttcgcgatcttcggcgcgagctggcggcc
gaggcacaggcgtgcgttcggttcgagacaccgccgggccggcagctgcagatcgacttc
ggctcgatctcggttgcgatcggtggcgaggtggtacgggtctatctgttcgtggcgacg
ctcgggtactcgcggcgcgggttcgtgatggccttccgccatgagcgccagtgcgcctgg
ttcgaaggtatcgaggcggcgttccggcacttcggcggggtgccgtccgaggtgctgctc
gacaacgccaaggcgctcgtcctgcatcacgacgcgaccacgcgcaaggtcgtgttcaac
gagcgcttccacagctttgcgcgctactgggacttccggccgcgggcctgcgcgccctat
cgcgcgcggacgaagggcaaggacgaacggggcgtcggctacgtcaagcgaaacgccatt
gccgggcggtctttcacatcctgggccgagctggaggcccacctcgcctggtggatgcgt
gacattgccgatcggcgcgttcatggcacgaccggcgagccgccgattgagcggttcgtc
cgcgacgaggccgacaccttgcgaccgatcggcgggcgaccaccgttccgacaggtccgc
gaggtggcgcggcgggttcagggggacggctgcatcacgcttgataccaatcactacagc
gtcccgtggcagctgatcggcgccgaggtaacggtcgagcaggcggacggaatcgtccgc
atccgccatggcggatgcgaagtggcctgtcatccgctccgccggggacggcgcgaacgg
gcgatcgattccgcccatctcgccggcattgtcgccggcggaggcccgcgccctgtcccg
ccggcgcccgagggctgcgctctgttgcggccgctcgccgagtacgaggccgtggcggga
ggtggctggtga
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