Defluviicoccus sp. SSA4: HWD60_01545
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Entry
HWD60_01545 CDS
T06717
Name
(GenBank) Crp/Fnr family transcriptional regulator
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
dex
Defluviicoccus sp. SSA4
Pathway
dex02020
Two-component system
dex02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dex00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HWD60_01545
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HWD60_01545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dex03000
]
HWD60_01545
Transcription factors [BR:
dex03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
HWD60_01545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
MarR
Crp
GntR
HVO_A0261_N
HTH_Cmi2_C
Rrf2
TrmB
MarR_2
HTH_69
HTH_IclR
HTH_7
Motif
Other DBs
NCBI-ProteinID:
QLH37924
LinkDB
All DBs
Position
288396..289148
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AA seq
250 aa
AA seq
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MLKSKAANESVRSIPSVIEAEVSERSVLAEIELFKEVDRDALLPIERACRFRRFSAHEHI
FEKDAVSTDVFFVVRGKIRIVNYSVSGREISFADVFEGNYFGELSAIDGQPRSAGAMAIE
DTLIMALPRRLFLALLADYPQTALRVMRKLAQMVRTADERIMDLSTVAAQSRVQAELLRQ
AHSHKTVGNAAVIEPIPIHSDIASRVSTTRETVARVLNDLARQGIVQRTRTALLIRDMGL
LQSMVEEARG
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaaagcaaggctgcgaacgagtctgttcggtcgattccgagtgtgattgaggct
gaggtttcggaacgcagcgtcctggccgagatcgaattgttcaaggaagtggatcgcgac
gcgctgcttccgatcgagcgggcgtgtcgcttccggcggttttcggcgcatgagcacatc
tttgaaaaggatgcggtctcgaccgatgtgttctttgtcgttcgtggcaagattcgcatt
gtcaactattcggtttcgggccgcgaaatcagttttgccgatgttttcgaagggaattat
ttcggcgaactatcggccatcgacggccagccgcgttccgccggcgcgatggcgatcgag
gatacgctgatcatggcgctgccgcgccggctgtttctggcgctgctggcggactatcct
cagacagcgctgcgcgtcatgcgcaagctggcgcagatggtgcgcacggcggacgagcgg
atcatggatctgtcaaccgtggccgcgcagagccgggttcaggcggaactgctgcgccag
gcgcactcacacaagacagtaggcaacgcggcggtgatcgaaccgatcccgattcacagc
gacattgcgagccgtgtgtcgaccacacgcgaaacggtcgcgcgtgtcctcaacgacctg
gcgcggcagggcattgtccagcggacccgcaccgcactgctgatccgcgatatgggattg
ctgcaatcgatggtggaggaagcgcgcggctga
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