Defluviicoccus sp. SSA4: HWD60_06060
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Entry
HWD60_06060 CDS
T06717
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
dex
Defluviicoccus sp. SSA4
Pathway
dex00541
Biosynthesis of various nucleotide sugars
dex01100
Metabolic pathways
dex01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
dex00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
HWD60_06060 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
dex01005
]
HWD60_06060 (kdsA)
Enzymes [BR:
dex01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
HWD60_06060 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
dex01005
]
Lipid A
HWD60_06060 (kdsA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
NeuB
Motif
Other DBs
NCBI-ProteinID:
QLH40950
UniProt:
A0A7D5MYN9
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All DBs
Position
1233509..1234387
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AA seq
292 aa
AA seq
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MDRATHCRGAQQGDFPHHVSVNGLAIGNDLPLVIIAGPCVMESREHALECAHALAEMARD
RDLGLIYKSSFDKANRTSLSGARGLGLEAALPVFAEVREQCGLSVLTDVHEPEQCVQVAQ
VVDVLQIPAFLCRQTDLLVAAAKTGKAINVKKGQFLAPWDMANVVDKIRAAGNDRVMVCE
RGASFGYNTLITDIRALPILARTGCPVVFDATHSVQQPGGQGTSSGGQREFAPVLARAAV
AVGVAAVFIETHPDPDKAPSDGPNMIPMKRLPEILDLLLELDQFAKAHPVAV
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atagacagagcaacacactgcagaggagcccaacagggtgacttcccgcaccacgtttcg
gtgaacggacttgcaattggcaacgatctgccactcgtcatcatcgccggtccctgcgtc
atggagagccgggaacacgcgcttgagtgcgcgcatgctttggccgaaatggcgcgcgac
cgcgatttgggactgatctacaagagctcgttcgacaaggccaaccggaccagcctcagt
ggcgcccgcggtctcgggcttgaggcggcgctgccggtgtttgccgaggtgcgcgagcag
tgcggcctgtcggtgctcaccgacgtgcacgagcccgagcagtgtgtccaggtcgcccag
gtggtggatgttctgcagatcccggcctttctctgccggcagaccgacttgctggtcgcc
gcggctaagaccggtaaggcgatcaacgtcaagaagggccagtttctcgcaccctgggac
atggcaaacgtggtcgacaagatccgtgccgctggcaacgaccgggtgatggtctgtgaa
cgcggcgccagctttggctacaacacactgatcacggacatccgcgcgctgccgatcctg
gcgcgcaccggttgtccggtcgtcttcgacgcgacgcactcggtgcagcagccgggcggg
caggggacgtcatcgggtggccagcgggagtttgcaccggtcctggcgcgcgctgcggtt
gccgtgggcgttgcagccgtgtttatcgagacgcatcccgatcccgacaaggcgccgagc
gacggaccgaacatgattccgatgaagcggttgcccgagattctggatcttctgctcgaa
ctggaccagttcgccaaggcgcacccggtggcggtgtag
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