Defluviicoccus sp. SSA4: HWD60_08230
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Entry
HWD60_08230 CDS
T06717
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
dex
Defluviicoccus sp. SSA4
Brite
KEGG Orthology (KO) [BR:
dex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dex03400
]
HWD60_08230
Enzymes [BR:
dex01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
HWD60_08230
DNA repair and recombination proteins [BR:
dex03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
HWD60_08230
Prokaryotic type
HWD60_08230
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QLH40992
UniProt:
A0A7D5MY29
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All DBs
Position
complement(1706337..1707968)
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AA seq
543 aa
AA seq
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MARDPPLATPAAVVWFRQDLRVADHPALMAAAAGGPVAPLYVLDDVTPGVWRMGGASRWW
LHASLATLSEALSARGVPLCLRRGASADVVVAFAREIGAVAVHAIRQNEPFWQPVETRLA
RRLQDLGIRLHVHDGATLFPAGSIAGRDGRRLRVFTXFWRAXPSSPAAPEPVSEPTRLQS
LPVALPPSDRLDDWQLRPTTPDWAQGLRETWQPGEAGANARLASFIDEDLRHYRSERDRP
XARVTSRLSPYLHFGEVSPRQVWHAVRDHMHAVPDETAAGEAFLRELAWREFNIDVLDRF
PQLPDQPLQPRFASXPWEEDTAALRAWQRGQTGYPLVDAGMRQLWHTGWMHNRVRMITAS
FLVKHLLIPWQMGEAWFWDTLVDADLANNAGSWQWVAGCGTDAAPYFRIFNPVLQGEKFD
PRGASVRRWVPELTALPDRWIHKPWQATALERAAASVRLGIDYPEPIVDHTQARARAGRL
CTTLTNDGDMTAIRWRRRLSCSQNVNQSHLYHRGVTPSGASPRGTCGVKSLQTLSTYRFL
GVY
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggctcgggatccgccgttggccacacctgctgctgtcgtctggttccgccaggatctc
cgcgtggccgatcatccggcgctgatggcggcagccgcgggcgggccggtggcgccgctc
tacgttctcgacgacgtaacgccgggcgtctggcggatgggcggggcgagccgctggtgg
ctgcatgccagcctcgcgacgttaagcgaggcgctttcggcgcgcggcgtgccgctctgc
ctgcgccgtggtgcgtcggcagacgtggtggtggcgttcgcccgcgagatcggcgccgtg
gcggtgcacgcgatccggcagaacgaaccgttctggcagccggtcgaaacacggcttgcc
cgccggctgcaggacctgggcatccggctacacgtgcacgacggcgccacgctgtttcca
gcgggctcgattgccgggcgcgacggccgccggctgcgggtgttcaccnccttctggcgc
gccntgccaagcagccccgccgcccctgagccggtgtcggaacccactcggctgcagtct
ctgccagtggcgctgccgccaagcgatcggcttgacgactggcagctgcggccaaccacg
ccggactgggcgcagggcctgcgcgagacctggcagccgggcgaggcgggtgcgaatgcc
cgcctcgcgtccttcattgacgaggatttgcgtcattaccggagcgagcgcgatcggccg
ngagcccgggtgacctcgcggctgtcgccatatctgcattttggtgaggtctcgccacga
caggtctggcacgccgtccgtgatcacatgcacgccgtccccgatgaaactgcagcgggc
gaagcattcctgcgcgagcttgcgtggcgggagttcaacatcgacgtgctcgatcgtttt
ccgcaactcccggaccagccgctgcagccgcgcttcgcgtctnttccctgggaggaggac
acagcggcgctgcgggcatggcaacgcgggcagacgggttatccgctggtcgatgccggg
atgcggcagctgtggcacaccggctggatgcacaaccgggtgcggatgatcactgcgtcg
ttcctggtcaagcacctgctgatcccgtggcagatgggagaagcgtggttctgggacacg
ctggtcgatgccgatctcgccaacaacgccggcagctggcagtgggtcgccggctgcggg
accgacgccgcaccttacttccgcatcttcaacccggtgctgcagggcgaaaaattcgat
ccccgcggtgcctccgtgcgccggtgggtcccggagctgacggcattgccggaccggtgg
atccataagccgtggcaggcgacggcgctggaacgggcagccgccagcgtccggctcggg
atcgactacccggagccgatcgttgaccacactcaggcgcgggcgcgcgctggccgcctt
tgcacaactctgaccaacgatggcgacatgacggcaatacgatggcggcgtcgtctctct
tgttcgcagaatgttaaccagtcgcatttatatcacagaggcgtgacacccagcggcgcg
agcccacgcgggacttgcggcgtgaaaagtctccagacactatcaacttaccgttttctg
ggggtttattga
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