Defluviicoccus sp. SSA4: HWD60_08290
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Entry
HWD60_08290 CDS
T06717
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
dex
Defluviicoccus sp. SSA4
Pathway
dex03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HWD60_08290 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dex03019
]
HWD60_08290 (recQ)
03400 DNA repair and recombination proteins [BR:
dex03400
]
HWD60_08290 (recQ)
Enzymes [BR:
dex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HWD60_08290 (recQ)
Messenger RNA biogenesis [BR:
dex03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HWD60_08290 (recQ)
DNA repair and recombination proteins [BR:
dex03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HWD60_08290 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
SecA_DEAD
Cas3-like_C_2
AAA_22
Mrr_N
Motif
Other DBs
NCBI-ProteinID:
QLH38935
UniProt:
A0A7D5MUG3
LinkDB
All DBs
Position
1716768..1718666
Genome browser
AA seq
632 aa
AA seq
DB search
MTQAATRVPEETDLAAARETLHRVFGFADFRAGQEEIVGAVLSGADVLAVMPTGSGKSLC
FQLPALLRPGLTIVVSPLIALMRDQVAQLQALGVAAGSLNSGNXGSENADIRRRLRAGDL
RLLYVAPERLLRPEMADLLQDSHVRLLAIDEAHCVSQWGHDFRPEYLALGEVRRWLPGVQ
ALALTATADAATRADIEGKLFATPPCTFVRSFDRPNLHLAMRPKANPRRQLAAFIGARRE
RSGIVYCASRKRTEALADALAAEGHRALPYHAGLDQPVRARHQDLFQQEDGVIIVATVAF
GMGIDKPDVRFVCHADMPSSIEAYYQEIGRAGRDGLPAETLTLHGLEDVRLRQIQINESE
APDARKQIDRARLNALLSLCEAPRCRRQTLLAYFGEASEPCGNCDLCQEGDAXFDGTIEA
QKAMSAILRTGERFGSEHLIRLLTGVADEKMRRFGHDALPTFGVGRDHKAEAWRSIFRQL
YAAGLISLDMLDHGAWKLTEQGRDVLRGREXIQLRAPAEEKTAGPRARSGREGGKHPPAF
SQAPADGPLLAALKALRLQLARSQGAPAYVVFSDRTLIEMASLRPTTPAALREITGVGEA
KLERYGAAFLDVLCRHIQASESVSNAMGSDDV
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaagcagcaacgcgggtgccagaggagactgacctcgcggcagcacgtgaaacg
ctgcaccgcgtcttcggtttcgcggattttcgcgccggccaggaggagatcgtcggtgcg
gtactgtcgggtgccgacgtgctcgcggtgatgcccaccggcagcggcaagtcgctgtgc
ttccagcttccggcgctgctgcgtccggggctcacgatcgtcgtctcgccgctgatcgcg
ttgatgcgcgatcaggtggcgcagcttcaggctttgggcgtcgctgccggcagcctgaat
tcgggcaacgangggagcgagaacgcggacatccgcaggcggctgcgcgcgggcgacctg
cgcctgctgtacgtcgccccggaacggctgctgcgcccggagatggcagacctgctgcag
gactctcacgtccggctgctggcgatcgacgaggcgcactgcgtgtcccagtgggggcac
gacttccggcccgaatatctggcgttgggtgaggtgcgccgctggctgccgggagtgcag
gcgctggcgctgaccgcgaccgccgacgctgcgacccgggcagacatcgaaggcaaactg
ttcgcaactccgccatgcaccttcgtccgctcgtttgaccggccgaacctgcatctggca
atgcggccgaaggcgaatccgcgccgccagctcgcagcgttcatcggcgcgcggcgggag
cgcagcggtatcgtttactgcgcgtcacgcaagcgcaccgaggcactggccgacgcgctc
gccgccgaaggacaccgggcactgccctatcacgcaggactcgatcagccggtgcgcgcc
cgtcaccaggacctgtttcagcaggaagacggggtgatcatcgtcgccaccgtcgctttc
ggaatgggcatcgacaagccggatgtgcgcttcgtctgccacgccgacatgccatccagc
atcgaggcctactatcaggagatcggtcgtgccgggcgcgatggtctgccggcggagacg
ctgacgctgcacggcctggaggatgtccggctgcgccagatccagatcaacgagagcgag
gcgcccgacgcgcgcaagcagatcgaccgggcgcggctgaacgcactgctgtcgttgtgc
gaggcgccccgttgtcgccggcagacgttgcttgcctacttcggngaagcgtcggaaccc
tgcggcaactgcgatttgtgccaggagggtgacgctnngttcgatgggaccatcgaggcg
cagaaggcgatgtcggcgatcctgcgtaccggtgagcggttcggcagcgagcatctgatc
cgcctgctgaccggggtggcggacgaaaagatgcgccggttcggacacgatgcgctgcct
accttcggcgtcgggcgggatcataaggccgaggcgtggcgctcgatcttccgccagctt
tacgctgcgggactgatctcactcgacatgctggaccatggtgcctggaagctgacggag
caggggcgcgatgtgctgcgtggccgcgagagnatccaactgcgtgcccccgcggaagag
aagacagcnggtccgagggcgagatcggggagggaagggggcaagcacccgcctgctttc
tcacaagctccggctgacgggccgctgctggcagcactgaaggcgctgcggctgcagctc
gcccgcagccagggcgcaccggcctatgtggtgttttccgaccggacgctgatcgagatg
gcaagtctgcgtccgacgacgccagcggcactgcgggaaatcaccggggtcggtgaagcg
aagctggagcgctacggggctgcttttctggacgtcttgtgccggcacatacaggcaagc
gagtccgtatccaatgccatggggtcggacgacgtctga
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