Defluviicoccus sp. SSA4: HWD60_08880
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Entry
HWD60_08880 CDS
T06717
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
dex
Defluviicoccus sp. SSA4
Pathway
dex03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HWD60_08880 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dex03400
]
HWD60_08880 (ruvB)
Enzymes [BR:
dex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HWD60_08880 (ruvB)
DNA repair and recombination proteins [BR:
dex03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HWD60_08880 (ruvB)
RecFOR pathway proteins
HWD60_08880 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_16
Mg_chelatase
AAA_2
AAA_3
AAA_22
TIP49
nSTAND3
NB-ARC
AAA_14
TsaE
AAA_18
NACHT
Rad17
RNA_helicase
NTPase_1
AAA_33
AAA_24
NPHP3_N
AAA_28
AAA_17
IstB_IS21
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
QLH39029
UniProt:
A0A7D5MX71
LinkDB
All DBs
Position
complement(1849345..1850457)
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AA seq
370 aa
AA seq
DB search
MSDGGRDAARSGDVSAIADAGDAAPGRALLDGARGEADAGETRMRPASLDDFVGQRAACR
NLRVFVTAAVARREXLDHVLLHGPPGLGKTTLAQIVAHEMGVGFRATSGPVIARPGDLAA
ILTNLEPHDVLFIDEIHRLSPAVEEILYPAMEDGKLDLIIGEGPAARTIRIDLPPFTLVA
ATTRAGLITTPLRERFGIPLRLEFYDVDDLERIIGRGAGVLSMVLTADGAREIAARSRGT
PRVAIRLLRRVRDFAAVAGSTRXDREAADAALGRLEVDGRGLDAADRRYLRCIAEFYGGG
PVGVETLAAALAEERDTIEDVIEPYLIQQGFLQRTPRGRALAAHAWAYLGLPQPEQASGP
QLPLGFDDGR
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatggcggccgtgatgcggcgcgcagcggtgacgtcagcgccattgcggacgcc
ggtgatgcagcgcccgggcgtgccttgctggacggtgcgcgcggcgaggcggacgcgggc
gagacacgcatgcgtccggcgtcgctcgatgatttcgtcggccagcgcgcggcctgccgc
aacctgcgggtttttgttaccgccgccgtcgcccgacgcgaanccctcgaccatgtcttg
ctgcatggccctccggggctcggcaagacgacgctggcacagatcgtggcacacgagatg
ggggtcggctttcgcgccacgtccggtccggtgattgcccggccgggcgacctggcggca
atcctgaccaacctggagccgcacgacgtcttgttcatcgacgagattcaccgtctgtcg
ccagcggtcgaggaaatcctctatccggccatggaggacggcaagctcgacctgatcatc
ggcgagggtccggctgcgcgcaccatccgcattgacctgccgccgtttaccctggtcgcg
gccaccacccgggccggcctgatcaccacaccgttgcgcgagcgtttcggcattccgctg
cggctggagttctacgatgtggatgatctcgaacggatcattgggcgcggcgcaggcgtg
ttgagcatggtgttgacggccgatggtgcccgtgagatcgcggcacgctcgcgcggcaca
ccgcgcgtcgcgatccggcttttgcgccgggttcgcgattttgccgcggttgcggggtcg
acgcggntggatcgggaggcggccgatgcggctctcggccgcctggaggtggacggacgg
ggcctcgatgccgccgaccggcgttatctgcgctgcatcgccgaattctatggcggcggg
cccgtgggtgtggaaaccctggccgccgcactggccgaggagcgggatacgatcgaggac
gtgatcgagccctacctgatccagcagggtttcctgcagcgcacgccgcggggccgggca
cttgccgcacacgcgtgggcgtaccttggcctgccacagccggaacaggcatctggtccg
cagttgcctctggggttcgacgatggccgttga
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