Defluviicoccus sp. SSA4: HWD60_09095
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Entry
HWD60_09095 CDS
T06717
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
dex
Defluviicoccus sp. SSA4
Pathway
dex03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HWD60_09095 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dex03019
]
HWD60_09095 (groL)
03110 Chaperones and folding catalysts [BR:
dex03110
]
HWD60_09095 (groL)
03029 Mitochondrial biogenesis [BR:
dex03029
]
HWD60_09095 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dex04147
]
HWD60_09095 (groL)
Enzymes [BR:
dex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
HWD60_09095 (groL)
Messenger RNA biogenesis [BR:
dex03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
HWD60_09095 (groL)
Chaperones and folding catalysts [BR:
dex03110
]
Heat shock proteins
HSP60 / Chaperonin
HWD60_09095 (groL)
Mitochondrial biogenesis [BR:
dex03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
HWD60_09095 (groL)
Exosome [BR:
dex04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
HWD60_09095 (groL)
Exosomal proteins of other body fluids (saliva and urine)
HWD60_09095 (groL)
Exosomal proteins of breast cancer cells
HWD60_09095 (groL)
Exosomal proteins of colorectal cancer cells
HWD60_09095 (groL)
Exosomal proteins of bladder cancer cells
HWD60_09095 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
QLH39068
LinkDB
All DBs
Position
1896608..1898266
Genome browser
AA seq
552 aa
AA seq
DB search
MAAKDVKFGSDARARMLHGVDVLANAVKVTLGPKGRNVVIEKSFGAPRITKDGVTVAKEI
ELSDKFENMGAQMLREVASKTSDEAGDGTTSATVLGQAIVREGAKAVAAGMNPMDLKRGI
DLAVEAVIKDLKSRSRQVETNAEIAQVGTISANGEKEIGDMLARAMEKVGKEGVITAEEA
KSLSSELEVVEGMQFDRGYTSPYFITNAEKMNCELESPFILIHEKKLSGLQPLLPVLEAV
VQSTRPLLIIAEDIEGEALATLVVNKLRGGLKVAAVKAPGFGDRRKAMLEDIAILTSGQV
ISEDLGIKLENVSLEMLGTAKKVVITKEETTIIEGSGEHDDIKARCNQIRAQIEETTSDY
DREKLQERLAKLAGGVAVIRVGGATETEVKEKKDRVEDAMHATRAAVEEGIVPGGGVALL
YASQALXPLTAANDDIKHGIEIVRKALQAPVRQIAENAGVDGAVVAGKLIEKNELTLGFD
AQSEEYVDMFKAGIIDPTKVVRTALMDAASVASLLITTEAMVAEKPEKKSPGMPGGDMGG
MGGMGGMGGMDF
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaagacgtcaaattcggttcngacgcccgtgcacgcatgctgcacggggtg
gacgtactggcaaacgcggtgaaggtgacgctgggcccgaaggggcgcaacgtggtgatc
gaaaagagcttcggcgcgccgcggatcaccaaggacggcgtgaccgtcgccaaggagatc
gaactcagcgacaagttcgagaacatgggcgcgcagatgctgcgcgaggtcgcttcgaag
acctccgatgaggccggtgacggcaccaccagcgccaccgtgctgggccaggcgatcgtg
cgcgagggtgcgaaggcggtggccgccggcatgaacccgatggacctgaagcgcggcatc
gaccttgccgtcgaagcggtgatcaaggacctgaagtcgcgctcgcgccaggttgagacc
aacgccgagatcgcccaggtcggcaccatctccgccaatggcgagaaggaaatcggcgac
atgctcgcccgcgccatggagaaggtcggcaaggaaggcgtgatcaccgccgaagaggcg
aagagcctgtccagcgagctggaagtggtcgagggcatgcagttcgatcgcggctacacc
tcgccctacttcatcaccaacgccgagaagatgaactgcgagctcgagagcccgttcatc
ctcatccacgagaagaagctctccggcctgcagccgctgctgccggtgctggaagcggtt
gtccagtccacccgtccgctgctgatcatcgccgaggacatcgagggtgaggcactggcg
acgctggtcgtcaacaagctgcgcggtggcctgaaggttgctgcggtgaaggcgccgggc
ttcggcgaccgccgcaaggccatgctggaagacattgccatcctgacctccggccaggtg
atctccgaggatctcggcatcaagctcgagaacgtcagcctcgagatgctgggcacggcg
aagaaggtggtcatcaccaaggaagagaccaccatcatcgagggctccggcgagcacgac
gatatcaaggcccgctgcaaccagatccgggcgcagatcgaggagacgacctcggactac
gaccgcgagaagctgcaggagcgcctcgccaagctggccggcggcgtggcggtgatccgc
gtcggtggtgcgaccgagaccgaggtgaaggaaaagaaggaccgggtcgaggacgccatg
cacgccacccgcgcggcggtcgaggaaggcatcgttccgggcggcggcgtcgccctgctg
tatgccagccaggccctgganccgctgacggcggcaaacgacgatatcaagcacggcatc
gagatcgtccgcaaggcgctgcaggccccggtgcggcagatcgccgagaacgctggcgtt
gatggcgccgtcgtggccggcaagctgatcgagaagaacgagctcacgcttggcttcgat
gcgcagagcgaagaatacgtcgacatgttcaaggccggcatcatcgacccgaccaaggtc
gtgcgcacggcgctgatggatgcggcttccgttgcctcactgctgatcaccaccgaagcg
atggttgccgagaagccggagaagaaatccccggggatgccgggcggcgacatgggtgga
atgggtggaatgggcggcatgggcggcatggatttctga
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