Defluviicoccus sp. SSA4: HWD60_09945
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Entry
HWD60_09945 CDS
T06717
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
dex
Defluviicoccus sp. SSA4
Pathway
dex02020
Two-component system
dex02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
dex00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HWD60_09945
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
HWD60_09945
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
dex02022
]
HWD60_09945
02035 Bacterial motility proteins [BR:
dex02035
]
HWD60_09945
Two-component system [BR:
dex02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
HWD60_09945
Bacterial motility proteins [BR:
dex02035
]
Flagellar system
Flagellar assembly proteins
Others
HWD60_09945
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
Response_reg
AAA
AAA_16
AAA_2
AAA_3
HTH_50
AAA_19
Mg_chelatase
AAA_7
nSTAND3
MCM
HTH_Tnp_ISL3
HTH_30
AAA_22
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QLH39198
LinkDB
All DBs
Position
2075891..2077270
Genome browser
AA seq
459 aa
AA seq
DB search
MRLMILGSLAGQLGAASRVAMSRGAKVLHAEDAEAALHALRTGAGADLVLADVRLDVARL
IQSLEAERIAVPVVACGVANDARAAVEAIKAGAREYLPLPPDPELIGALLATVARDHHAV
VHADPRTASILAMAERVAASEASVLITGPSGTGKEVLARFVHAHSRRSAARFVAVNCAAI
PDALLESELFGHEKGAFTGALARRIGRFEEADGGTILLDEISEMXPHLQAKLLRVIQERE
VDRVGGSQPVKINVRILATSNRDLEDEVARGRFRADLYFRLNVVNLQVPQLSERPADIPV
LARHFADKYARANGLSAMPVSEQAMRALCVYSWPGNVRELENTMHRAVLLSSGPSINAEA
IVLQSGALGAPRAASXPEAVQSEAAQRGPAALVGRTVADVERDLIIDTLRHCFGNRTHAA
NILGISIRTLRNKLRQYMDEGIAVPPAGDRFDAVASFGV
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgcgactgatgatcctgggatccctggccggacagctcggcgccgcgagccgtgtcgcg
atgagccgcggggccaaggtgctgcacgcggaggacgccgaagccgcgctgcacgccctg
cgcaccggtgcgggtgccgacctcgtgctggccgacgtgcgtctcgacgtcgcacggctg
atccagagcctggaagcggaacgcattgcggtgccggtggtggcctgcggtgtcgccaac
gatgcgcgcgcagcggtcgaggcgatcaaggccggcgcacgcgaataccttccgctgccn
cccgatccggagctgatcggcgccctgctcgccaccgtcgcccgtgatcatcacgccgtc
gtacatgccgatccgcgcaccgcgtcgatcctggcaatggccgagcgcgttgccgccagt
gaggccagcgtgctgatcaccggcccgtcggggaccggcaaggaagtcctcgcccgcttc
gtccacgcccacagccggcgcagcgccgcacgcttcgtggccgtcaactgtgctgcgatc
cccgatgcgctgctggaatccgagctgttcggacatgaaaaaggcgccttcaccggtgcg
cttgcccggcgcatcggccgcttcgaggaggcagacggcggaacgatcctgctcgacgag
atcagcgagatgganccccacctgcaggcgaagctgctgcgggtgatccaggagcgggaa
gtcgaccgagtgggcggctcgcagccggtcaagatcaacgtccgcattctcgccacctcc
aaccgcgacctggaagacgaagtggcgcgcgggcgctttcgtgctgatctctacttccgt
ctcaatgtcgtcaacctacaggtgccacagctcagcgagcggccggccgacattccggtg
ctcgcccggcattttgcggacaagtacgcgcgtgccaacggcctgagcgcgatgccggtg
agcgagcaggcgatgcgcgccctgtgcgtctactcctggccgggaaacgtccgtgaactc
gagaacacgatgcaccgggcggtgctgctctcaagcggccccagcatcaatgccgaggcg
atcgtgctgcaatcgggcgcgctcggggcgccccgcgcggcttccnngccggaagcggtg
cagtcggaagcagcacagcggggaccggcggcnctcgtcgggcgcacggtggccgatgtc
gaacgcgacctgatcatcgatacgctgcgccactgcttcggcaaccgcacccacgccgcc
aacatcctcggcatctccatccgcacgctgcgcaacaagctgcggcagtacatggatgaa
ggcatcgccgtacctcccgcgggcgaccggttcgacgcggtcgccagcttcggcgtgtga
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