Defluviicoccus sp. SSA4: HWD60_10650
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Entry
HWD60_10650 CDS
T06717
Name
(GenBank) lytic transglycosylase domain-containing protein
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
dex
Defluviicoccus sp. SSA4
Brite
KEGG Orthology (KO) [BR:
dex00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dex01011
]
HWD60_10650
Enzymes [BR:
dex01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
HWD60_10650
Peptidoglycan biosynthesis and degradation proteins [BR:
dex01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
HWD60_10650
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
Motif
Other DBs
NCBI-ProteinID:
QLH39316
UniProt:
A0A7D5RTK8
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All DBs
Position
2230038..2232020
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AA seq
660 aa
AA seq
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MSISRLLRLLVTGAVLVLPISVPAVARADTEASVVTDTANALALGRVGDWSEARRIAAGA
RSPLVAALVVWVDATRQPTGGGSFEEITGVIIDHPDWPRQHTLRKRAELALDGSESDAAI
LGWFDRHPPVTLAGALRYVQALQAAGKHKRAAKAARNAWINTDAQTVEEEDGFYAAYADL
LINDDTVRRLDRLLWAGRTTAAERLLVRVDNAHRAVASARIALRRRSSDAETALAAVPDA
MRSDPGLIYEHARWLRRSDNDAAARQLLIAHPVDAANPDLFXGERSRLARSALTDGNADE
AYRVVRAHGIISGSEFADAEWLAGWIALRFLQQPDTAARHFLTMFENVSHPVSRARGAYW
SARAAEQAGDHVAATLWHRAAAQHGVAFYGQLSAAEIRPNEPLVLPPEPSTTSDDVERFQ
AHALTQVVRLLAAAGETDAQPSFVLRLAAVENTPGWKNMTATLATQIRRPDLAVAVARKS
VGDGRPLMRNGYPITALPDDNATLAQPVETPLIFAVIRQESAFNARALSPAGAQGLMQLM
PGTARTVATKAGVGYAPASLVNDPEYNISLGRAYLGSLLSRFDGSYVLSLAAYNAGPNRV
DQWLQSNGDPRIGKNAAVDWIELIPFNETRNYVQRCLESLQVYRARTGSLQLAQTGGLLH
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
gtgtcaatctcgcgtctgttgcggttgcttgtgaccggagcggttcttgttctgccgatc
tcagtgcctgctgtggcgcgggcggataccgaagccagcgtcgtcaccgatacagccaac
gcgctcgcactcgggcgcgtcggagactggtcggaagctcggcgcatcgcagcaggcgcc
cgctcgccactggtggccgctctcgtggtgtgggtggacgccacccggcagcccacgggc
ggaggcagcttcgaggagattactggcgtcatcatcgaccacccggactggccgcggcag
cacaccctgcgcaaacgcgccgagctggcgcttgacggcagcgaatccgacgccgccatt
ctgggctggttcgatcgccatccgccggtgaccctcgcgggcgcactgcgctacgttcaa
gcattgcaggcggccggaaagcacaagcgggcggccaaggccgcgcgcaacgcatggatc
aataccgacgcgcagaccgtggaggaagaagacggcttctacgctgcctatgccgatctg
ctcatcaatgacgataccgtccgccgtctcgaccggctgctctgggcgggccgcacgaca
gccgctgagcggctgctggtgcgggtcgacaacgcgcaccgggcggtggcatccgcgcgg
atcgccctgcgccgacggagcagcgacgcggaaaccgccttggcagcggtccccgatgcc
atgcggtccgatcccggcctgatctacgaacatgctcgctggctgcgacgcagcgacaac
gatgccgcggcccgccagctgctgatcgcccacccggtggatgcagccaaccctgacctg
ttctgnggggaacgttcacggctcgcccgcagcgccctgacggacggaaacgccgacgag
gcctaccgggtggtgcgtgcgcacggcattatttccggcagcgaattcgccgatgccgaa
tggctggccggctggatcgcgctgcgcttcctgcagcagccggacacggcggcacgccat
ttcctgaccatgttcgagaacgtcagccaccccgtcagccgggcgcgcggcgcatactgg
tcagcgcgcgccgccgaacaggccggcgaccacgtcgctgcgacgttatggcaccgggca
gcagcacagcacggagtggcgttctacggccagctcagcgccgccgagatcagacccaat
gagccgttggtgctgccgccggaaccgtccacgacatctgacgacgttgagcgcttccag
gcccacgcgctgacacaggtcgtccgcctgctggcggctgccggcgaaaccgacgcacag
ccaagcttcgtgctccggctggccgcagtcgaaaacacncccggctggaaaaacatgacg
gccacgctcgccactcagatccgccgccccgatctggcggttgccgtcgcccgcaagtcg
gttggcgacggaaggccgctgatgcgcaatggctatccgatcacggccttgccggatgac
aacgccaccctcgcgcagccggtagaaacaccgttgatcttcgccgtcattcgccaggag
agcgcgttcaacgcccgggccctgagccctgccggcgcgcagggcctgatgcagctgatg
cccggcacggcacgcaccgtcgccacaaaagcgggagttggttacgctcccgcttctctc
gtcaacgacccggagtacaacatcagcctcggccgcgcctacctcggctccctgctcagc
cggttcgacggctcctacgtgctcagcctcgcagcctacaacgccggtcccaaccgcgtg
gatcagtggttgcagagcaatggcgatccgcgcatcggcaagaatgcggcggtagactgg
atcgaactcattccgttcaacgaaacccgcaactacgtgcagcgttgcctggagagcctg
caggtctatcgtgcccggacgggcagcctgcagttggcacagacgggtggactgctgcat
tag
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