Defluviicoccus sp. SSA4: HWD60_12195
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Entry
HWD60_12195 CDS
T06717
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
dex
Defluviicoccus sp. SSA4
Brite
KEGG Orthology (KO) [BR:
dex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dex03021
]
HWD60_12195 (rpoH)
Transcription machinery [BR:
dex03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HWD60_12195 (rpoH)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r1_2
UCR_14kD
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
QLH39558
LinkDB
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Position
complement(2569696..2570589)
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AA seq
297 aa
AA seq
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MKTLSVPSIDSDRGLSRYYREIWAFPVLTAEEEYMFAIRLHEHGDTEAAHRLVTSHLRLV
AKIAAGYRGYGLPMADLIAEGNMGLMKAVKKFEPQRGFRLATYAMWWICAAITEYVLRSW
SLVKMGTLASQKKLFFSLGRIKRQLQILSDGPMNDEQAEQVADALSVSAQDVMDMDRRLG
SPDVSLNAPRNREDGESSEFMETLVDETPGPEVQAAEAEEQGMRRTMLTQALQTLPERER
HILTERQLKDDPMTLEELGTVYGISRERVRQLEVRAFDRLKKAMLQMTLAAAAPAAA
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgaagacattgagtgtgccgtcgattgattcggatcgtggtctgtcccggtactaccgg
gaaatctgggccttcccggtgttgacggccgaagaagaatacatgtttgcaatccggctg
cacgagcacggcgacacggaagcggcgcatcggctcgtcaccagccatttgcgtctggtc
gcaaagatcgccgccggctatcgcggatacggactgccgatggcggatctgattgccgaa
ggcaacatgggcctgatgaaggccgtcaagaaattcgaaccgcagcgcggcttccggctc
gccacgtatgcgatgtggtggatctgcgcggcgatcaccgagtacgtgctgcgttcgtgg
tcgctggtgaagatgggcaccttggcgtcgcagaagaagctgttcttcagcctgggccgc
atcaagcggcagctgcagattctcagcgatgggccgatgaacgacgaacaggcggaacag
gtcgccgacgctttgtcagtctcggcgcaggacgtcatggatatggaccgtcgactgggg
tctccggacgtatcgctgaatgcgccgcgcaaccgggaggacggagagagctccgagttc
atggagactcttgtggacgaaacccctggtcccgaagtgcaggccgccgaggcggaggag
cagggcatgcggcgcacgatgctgacccaggcgctgcagacgctgccggagcgcgagcgt
cacatcctgaccgagcggcagctcaaggacgacccgatgacgctggaggaactgggcacc
gtctacgggatcagccgggagcgggtccgtcagctggaggttcgtgcctttgaccggctg
aagaaggccatgctgcagatgaccctcgctgccgctgcaccggcggcagcctaa
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