Defluviicoccus sp. SSA4: HWD60_12905
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Entry
HWD60_12905 CDS
T06717
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
dex
Defluviicoccus sp. SSA4
Pathway
dex03030
DNA replication
dex03430
Mismatch repair
dex03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HWD60_12905
03430 Mismatch repair
HWD60_12905
03440 Homologous recombination
HWD60_12905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dex03032
]
HWD60_12905
03400 DNA repair and recombination proteins [BR:
dex03400
]
HWD60_12905
Enzymes [BR:
dex01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HWD60_12905
DNA replication proteins [BR:
dex03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HWD60_12905
DNA repair and recombination proteins [BR:
dex03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HWD60_12905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DNA_pol3_delta2
DUF3646
DNAX_ATPase_lid
AAA
AAA_22
AAA_30
RuvB_N
AAA_5
AAA_assoc_2
AAA_14
AAA_16
AAA_19
AAA_24
AAA_18
DEAD
DUF815
TsaE
DNA_pol3_delta_C
SRP54
nSTAND3
Glyco_tranf_2_5
Motif
Other DBs
NCBI-ProteinID:
QLH39670
UniProt:
A0A7D5MWX1
LinkDB
All DBs
Position
2726680..2728617
Genome browser
AA seq
645 aa
AA seq
DB search
MSDSALTPALVADPRFRVLARRYRPTSFDGLIGQQALVRTLSNAFRVGRIAHAYMLSGVR
GVGKTTTARIIARALNCVGPDGSGSVTIMPCGVCAHCTAIAEDRHLDVIEMDAASHTGVD
NIRELLDGVPYRPALARYKVYIIDEVHMLSEKAFNALLKTLEEPPEHVKFIFATTEIRKV
PVTVLSRCQRFDLRRVDAATLLQHLGRIAAHEQVTIEPAALQLLARAADGSVRDSLSLLD
QAIAHGGGAASEQTVRDMLGLADRQLTFDMLDAVMHGDAPAALAILEDQYRAGADPLLLI
EDLLALTHWLTRIKLAPDTALGADVPEAERVRGSEMAAGLAMADVTRTWQMLLKGLSETR
MAPVPLHAAEMLLVRLAYAAQLPSPAEALDALREEGQPSLSSSDXPRPRYNADLPAVPVL
LPVLADRQPGICPRPARAAMPPGTLHTGAVRSRPRGAGAIAAAGKHAGNRTGEAPXTAPT
LAPAATSGASPAGPASFRELVDRVRDRHEGLLHGELMADVHLVRFEPGSIELRLAEHAQP
DLPHRLARFLLGATGERWLVTVSRQPGEPTLREQRQAAQAARLAEAAKHPLVRAIFEAFP
GATLERLRENPTGAQTGTAVGSEDGDADDAPLAEETGVPDLPDDD
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatagcgcgctgacgcccgcgctggtcgcagacccgcgcttccgggtactggcg
cgccgctaccgtccgaccagcttcgatggcctgatcggccagcaggcgctggtccgcacg
ctctcgaacgcgttccgtgttggccgcatcgcccatgcctacatgctctcnggtgtccgc
ggcgtcggcaagacgacgacggcgcgcatcatcgcccgcgcgctgaactgcgtcgggccg
gacggatcgggcagcgtgaccatcatgccctgcggggtgtgtgcacactgcaccgcgatt
gccgaggaccggcatctggacgtgatcgagatggacgcggccagccacaccggcgtcgac
aacatccgcgaactgctcgatggcgtgccctaccggccggcgctcgcccgttacaaggtc
tacatcatcgacgaagtgcacatgctctcggagaaggcgttcaacgcccttctcaagacg
ctggaagagccgcccgagcatgtgaagttcatcttcgcgaccaccgagattcgcaaggtg
cccgtcaccgtgctctcgcgctgccagcgctttgacctgcgccgggtggacgcggcgacg
ctgctgcagcacctggggcgaatcgccgcccacgagcaggtaacgatcgagccggccgcc
ctgcagcttctggcacgcgccgccgacggcagtgtccgcgattcactgtctctgctcgac
caggcgatcgcgcatggcggcggggccgcctcggagcagacggtgcgcgacatgctgggc
ctcgccgaccggcagctgaccttcgacatgctcgatgcggtgatgcacggcgatgcgccc
gccgcactcgcgattctcgaagaccagtaccgggcgggcgccgacccgctgctgctgatc
gaagacctgttggcgctgacccactggctgacccggatcaagctggcaccggacaccgcg
ctcggcgccgacgtacccgaggcggagcgggtgcgtggcagcgagatggcggcaggcctt
gcgatggccgacgtcacccgcacttggcagatgctgctgaagggcctcagcgagacccgg
atggcgccggtgccgctgcacgccgccgagatgctgctggtccgcctcgcctacgccgcg
cagctgccgtcgccggccgaggccctggatgcgctgcgcgaggaaggccaacccagcctt
tcctcttccgatnnccctcgcccacgttacaacgcggacctgccggccgttccggttctc
cttcccgttctggcggatcgccagccggggatatgtccgcgtcccgcgcgggccgcgatg
cccccaggcacacttcacaccggcgccgtccggtcgcggccccgaggcgctggcgcgatc
gccgctgccggaaaacacgccggaaaccgaactggagaggctccanncacggcaccaaca
ctggcaccggccgccaccagcggggcaagccccgctggtcccgcaagcttccgtgaactg
gttgatcgggtacgcgaccggcacgagggactgctgcacggcgaactgatggcggacgtg
catctggtgcgcttcgagcccggcagtatcgagctgcggctggccgagcatgcgcagccg
gacctgccgcaccgtttggcccgattcctgctgggggcaaccggggagcgctggctggtc
actgtctcgcggcagccgggagagccgacgctgcgcgagcagcggcaggcggcacaggca
gcgcgactggcagaagcggccaagcatccgctggtgcgggcgatcttcgaggcctttccc
ggcgccaccctggaacgactgcgggagaacccaacgggtgcgcaaacagggaccgcggtc
gggagcgaggacggagacgctgacgacgcacctctggcggaagaaaccggcgtgccggac
ctgcccgacgacgactaa
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