Defluviicoccus sp. SSA4: HWD60_14085
Help
Entry
HWD60_14085 CDS
T06717
Name
(GenBank) RluA family pseudouridine synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
dex
Defluviicoccus sp. SSA4
Brite
KEGG Orthology (KO) [BR:
dex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dex03009
]
HWD60_14085
Enzymes [BR:
dex01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
HWD60_14085
Ribosome biogenesis [BR:
dex03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HWD60_14085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
QLH41108
UniProt:
A0A7D5MZL5
LinkDB
All DBs
Position
complement(2985155..2986579)
Genome browser
AA seq
474 aa
AA seq
DB search
MPARPRAEPVEVGPDDAGLRLDRWFRRHYPHVGHGTLERWLRTGQVRLDGRXARAADRVE
AGQQVRVPPAAQVPAAGKTSRPPAPPPTPEEAAELMRRVLYQDEQVLVIDKPAGLAVQXG
TRTTHHLDGLLDALAFDGERPRLVHRLDRDTSXVLVLARTAAAASKLAAAFASRAVHKLY
WAVVVGVPKIAAGKISQPLSKRFGAAGERVGADDEGMRXVTFYRVIEHAGSSAAWLALLP
RTGRTHQLRAHCTLLGTPILGDGKYGGASAFLAEVGDATRLHLHARXIQFPHPERGTVTV
EAPLPAHMGETFDXFGFDASTADGMPAEWDEPHRPAAKRTSRTDGADTRRSSARTGTRPP
KPPQRGGHHSGHRSGPRSGQGVGVGKLPKRRASPGVERPDFVPYIIVGDRAAEAECGADC
WAGCWGSRRPSGMIAGVRADRRKFHDQVFTRAGGMGRAAGNASAHPGRDQPGVR
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
ttgcccgcgcgtccccgcgccgagccggtcgaagtcggccccgatgacgcggggctgcgc
ctcgaccgctggttccgccgtcattacccgcacgtcgggcacggaacgctggagcgctgg
ctgcgcaccggccaggtgcgtctcgatggccggcnngcccgggccgcggaccgggtggaa
gcgggtcagcaggtgcgtgttccaccggcagcacaagtgccggccgcaggcaagacatcg
cgtccgccagcgccaccgccaacacccgaagaggcggccgagctcatgcgccgggtgttg
tatcaggatgagcaggttctcgtcatcgacaagccggcgggcctcgcggtgcagnggggc
acacggaccacccatcatctggatgggctgctcgacgctctggcctttgacggcgagcgg
ccgcggctggtgcatcggctggaccgggatacctcgngggtgctggtgctggcgcgcacc
gcagccgccgcttcgaagctggctgcggcgtttgcgtcccgcgcggtgcacaagctgtac
tgggcggtggtggtgggcgtccccaagattgctgcagggaagatcagccagccgctgtca
aaacggttcggtgcagccggcgagcgggttggggcggacgacgaggggatgcggncagtg
acgttctaccgcgtgatcgagcacgccggcagcagcgccgcctggctggcgctgctgccg
cgcaccgggcgcacgcaccagctccgggcgcactgcaccctgctgggcacgccaattctg
ggcgacggcaagtacggtggagcgtcggcattcctggccgaagtcggggacgccacccgg
ctgcacctgcacgcgcgccnnatccaatttccgcatcccgaacgcgggacggtcacggtc
gaagccccgctgccggcccacatgggcgaaacttttgatnttttcggcttcgacgcaagc
acagcggacggcatgcccgcagaatgggacgaaccgcaccgcccggctgcgaagcgaaca
tcgcggactgatggtgctgatacacgtcgctcttcagcccgaaccgggacgcgaccgccg
aaaccgccgcagcgcggcgggcatcacagcggacaccgcagtggaccccgcagtggacag
ggggtgggcgtggggaagctccccaaacgccgcgcaagcccaggggttgagcggccggat
ttcgtcccatacatcatcgtcggcgatcgggcggccgaagccgaatgcggggccgattgc
tgggccggatgctggggcagccgacggccgagcgggatgatcgccggagttcgggcagat
cggaggaagttccatgatcaggtattcacccgggctggaggtatggggagagccgctggc
aacgcttcggcgcatccaggacgagatcaaccgggcgttcggtga
DBGET
integrated database retrieval system
