Defluviicoccus sp. SSA4: HWD60_14220
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Entry
HWD60_14220 CDS
T06717
Symbol
rplC
Name
(GenBank) 50S ribosomal protein L3
KO
K02906
large subunit ribosomal protein L3
Organism
dex
Defluviicoccus sp. SSA4
Pathway
dex03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
dex00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
HWD60_14220 (rplC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
dex03011
]
HWD60_14220 (rplC)
Ribosome [BR:
dex03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Large subunit
HWD60_14220 (rplC)
Bacteria
HWD60_14220 (rplC)
Archaea
HWD60_14220 (rplC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_L4
Ribosomal_L23
Ribosomal_L3
DUF2009
Motif
Other DBs
NCBI-ProteinID:
QLH39862
UniProt:
A0A7D5RZ60
LinkDB
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Position
complement(3001547..3003307)
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AA seq
586 aa
AA seq
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MRTGLIAQKLGMSRIFADDGTHVPVSVLSLEGCQVVAQRTPEXDGYAALQLGAGKVKVKN
VTQPMRGHFAKASVEPKRTLAEFRVTPDMLVDVGAELTADHFVAGQPVDVIGVSIGKGFA
GGMKRHNFGGLRATHGVSISHRSHGSTGNRQDPGRTFPGKKMAGHMGDARVTVLNLEVVR
TDPERGLILIRGAVPGAKXAWVMIRDAVKRPRPDGVPVPAAFRAPVRVAEAPENSAPADN
AAEGMRTRLRAMLRLLRRRRNRLMQWDVINLDSETVGAVELPDGVFGLSPRPDILARTVN
WQLAKRRAGTHSTKLRGEVARTTKKPYRQKGTGRARQGSTKGPHMRGGAVVFGPRPRDHA
IDLPKQVRKLALKVALSAKCAAGELVILDRAELAEPKTKGLAARLTKLGWIKPLVIDAEA
PEINFSRAAHNIVGFDVLPSVGANVYDILRHDTLVLTRAAVDKLTERXGMSKLFAKRLVT
VGAERAYEVIRRPLITEKATRVSEYNQVAFVVANDATKPEIKAAVELLFKVKVKAVNTLI
QKGKHKRFRGRPGVRPDIKKAIVTLAEGHSIDVTTXTVDDHGTEAV
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaccggtctcattgcccagaagctcggcatgtcgcgcatttttgccgacgacgga
acgcacgttccggtttccgtgctgagtctcgagggctgccaggtggtggcgcagcggacg
ccggaanaggacggctatgccgcgctgcagctgggtgcaggaaaggtcaaggtgaagaac
gtcacccagccgatgcggggtcacttcgccaaggcctccgtcgagccaaagcggacgctg
gccgaattccgggtgacgccggacatgctcgtcgatgtcggagcggaactgacggcggat
catttcgtcgcggggcagccggtcgacgtgattggcgtgtcgatcggcaaaggcttcgcc
ggtggcatgaagcggcacaacttcggtggcctgcgcgcgacgcacggcgtgtcgatcagc
caccgcagccatggctcgaccggcaaccggcaggatccgggccgcaccttcccgggcaag
aagatggccgggcacatgggcgatgcgcgggtcacggtgctcaatctcgaagtcgtgcgc
accgatccggagcgcggcctgatcttgatccgcggcgcggtgccgggcgccaagngagcg
tgggtgatgatccgcgacgcggtgaagcggccccgtcccgacggtgtgccggtgccggcg
gccttccgcgccccggtgcgtgtggctgaggcgcccgagaacagcgcgcctgcggacaat
gcggctgaggggatgcgaacccggctgcgggcgatgctccgtcttctccggcggcggagg
aataggctgatgcagtgggatgtgatcaatctggatagtgagacggtgggagccgttgaa
cttcccgacggcgtcttcggcctttcgccgcgcccggatattctggcgcgtacggtcaac
tggcagttggcgaagcgccgggccggtacccacagcaccaagctgcggggcgaggttgcg
cgcacgaccaagaagccttaccggcagaaggggacaggccgcgcccgccaaggctcgacc
aagggaccgcacatgcgcggtggtgcggtcgtattcggtccccgaccgcgcgaccacgcc
atcgacctgccgaagcaggtccgcaagctggcgctgaaggtggcactttcggcgaaatgt
gctgcgggcgaactggtgattctcgaccgggccgaactggctgagccgaagacaaagggg
cttgcggcacggctcaccaagctcggctggatcaagccgctggtgatcgacgcggaagcc
ccggagatcaacttttcgcgcgcggcgcataacatcgtcgggttcgacgtgctgccgtcg
gttggcgccaatgtctatgacatcttgcgtcacgacacgctggtgctgacccgcgctgcc
gtggacaagcttacggagcggnctggcatgagcaagctctttgcgaagcgtctcgtcacc
gttggtgcggagcgggcatacgaggtgatccgccgcccgctgatcaccgaaaaggcgaca
cgcgtttccgaatacaatcaggtggcgtttgtcgtcgccaacgatgccaccaaacccgag
atcaaggcagcggtggaattgctcttcaaggtcaaggtgaaggccgtcaacaccctgatc
cagaaggggaagcacaagcggtttcggggtcgcccaggcgtgcggcctgatatcaagaag
gcgatcgtgaccctcgctgaagggcactcgatcgacgtcacgaccnggactgtagacgat
catggcactgaagcagtttag
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