Defluviicoccus sp. SSA4: HWD60_15830
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Entry
HWD60_15830 CDS
T06717
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
dex
Defluviicoccus sp. SSA4
Brite
KEGG Orthology (KO) [BR:
dex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dex03016
]
HWD60_15830
Enzymes [BR:
dex01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
HWD60_15830
Transfer RNA biogenesis [BR:
dex03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
HWD60_15830
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
RNase_T
Motif
Other DBs
NCBI-ProteinID:
QLH40113
UniProt:
A0A7D5MXB1
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All DBs
Position
3341513..3342148
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AA seq
211 aa
AA seq
DB search
MSGDSPQILLHHGDLPAGLALGARVAVDTETTGLNPHRDKLCLVQLSAGNNVCHLVHFPP
HLRDAYEAPNLKALLTDPQVCKLFHYARFDVTMLQRWLDITCTPVYCTKIASRLVRTYTD
RHGLKDLCRELLGIELSKEQQSSDWGAESLSPEQLRYAASDVLHLHRLRDKLDTMLSREG
RLDLAHACFGFLPHRARLDLEGWAEEDIFAH
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgagtggggacagtcctcagatcctgctgcatcacggagacctgccggcgggccttgcg
ctgggtgcgcgggttgccgtcgataccgagaccaccggcctcaatccgcaccgcgacaag
ctgtgcctcgtccagctgtccgcaggcaacaacgtctgccacctcgttcactttccgccg
cacctgcgcgacgcgtacgaggctccgaacctcaaggcgctgctcaccgatccgcaggtc
tgcaagctgttccattacgcccgcttcgatgtgaccatgctgcagcgctggctcgacatc
acctgtaccccggtctattgcaccaagatcgcgtcgcgcctggtccggacatacaccgat
cgacacggcctcaaggatctctgccgggaattgctgggaatcgagctgtcgaaggaacag
cagagttccgactggggcgctgagagcctgagccccgagcagctgcgttacgcggcgagc
gacgtcctgcacctgcaccggttacgggacaaactcgatacaatgctcagccgcgaaggt
cgcctggatcttgcccacgcgtgctttggcttcctacctcaccgtgcacgcctcgatctt
gaaggctgggcggaagaagatatcttcgcccactga
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