Defluviicoccus sp. SSA4: HWD60_18505
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Entry
HWD60_18505 CDS
T06717
Name
(GenBank) class I SAM-dependent RNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
dex
Defluviicoccus sp. SSA4
Brite
KEGG Orthology (KO) [BR:
dex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dex03009
]
HWD60_18505
Enzymes [BR:
dex01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
HWD60_18505
Ribosome biogenesis [BR:
dex03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HWD60_18505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRM5-TYW2_MTfase
Methyltransf_25
MTS
Cons_hypoth95
Methyltransf_15
Motif
Other DBs
NCBI-ProteinID:
QLH40525
UniProt:
A0A7D5S5D0
LinkDB
All DBs
Position
complement(3908997..3910409)
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AA seq
470 aa
AA seq
DB search
MKAQHRQQNRDGTVAQQRSRFGRPGRRRTPATTSGTALEVVIEAVGARGDGMAAGPHGRL
YVPLTALGDRVRVQPLQARGDGFACELLEVIEPGPERTQPPCPHFGRCGGCSLQHLNDSA
YVAWKEQRLDQALARXGLVPEVRDSLFRVPAGSRRRATFAAVHTKAGIVFGFAVRRXHEI
VDLVDCPVMAPPIAHLLPRLRSLLAHLRPPGGRCEVAVARLEGESGPGGAQADEDGELDV
VFTWPEPPSLAVREALATFADEADLARVSWRASVDVPAEPIACQRPIGAKPGGIFAPVPP
GGFLQATAAGEATLIAAVSTGVDGAATVADLFAGAGTFSLPLAWGGVRVHAVDADATALA
ALNAAARRMQPPVTLPTTDVRDLALRPLAEVELNRYEAVVFDPPRAGAAAQAEALARSRV
PTVIAVSCNPDSFARDARLLAAGGYRLQRITPVDQFLWSAHLELAACFRR
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcgcagcatcggcaacagaatcgggacggcacagtggcgcaacagcggagcaga
ttcgggcgaccgggtcgccggcgcacgccagcgacaacaagcggcacggcgctggaggtg
gtgatcgaggccgtgggcgctcgcggcgacggtatggccgcgggcccgcacgggcggctc
tacgtgccgctgaccgcacttggcgaccgggtgcgggtgcagccgctgcaggcccgcggc
gacggttttgcctgcgagctgctggaggtgatcgagcccggacctgagcgtacccagccg
ccctgtccgcacttcgggcgctgcggcggctgcagcctgcagcatttgaacgattccgcc
tatgtcgcctggaaggaacagcgcctcgaccaggcgctggcgcgcgnngggctcgtaccc
gaggtccgcgattccctgttccgggtgccggccggcagccggcggcgcgccacctttgct
gccgtgcacaccaaggccggcatcgtcttcggctttgcggtccgccggnggcacgagatt
gttgatctggtggactgcccagttatggcgccgccgatcgcgcacctgcttccccgtctg
cgctcgctgctggcccatctgcggccaccgggcggccgctgcgaggtagcggtcgcacgt
ctggagggcgaaagcgggccgggaggtgcacaggctgacgaggacggggaactcgacgtg
gtgttcacctggccggagcctccgtcgctcgcggtgcgcgaggcactggccacgtttgcc
gacgaggccgatctggcacgagtctcctggcgggcatccgtggacgtcccggcggagccg
atcgcctgccaacggccgattggcgccaagccgggcgggatattcgcaccggtgccgccg
ggcggctttctgcaggccacggccgccggcgaagcgacactgatcgcagccgtcagcacc
ggtgtggacggtgccgcaacggtggccgatctgtttgccggcgccggcaccttcagcctg
ccactggcttggggcggcgttcgggtgcatgccgtcgatgccgacgccaccgccctcgcg
gcgctgaacgccgccgcacgccggatgcaaccgcccgtgacgctgccgacgacggacgtc
cgcgacctcgccctccgtccactcgccgaagtagaactgaaccgctatgaggccgtcgtc
ttcgatccgccgcgcgccggtgccgccgcccaggccgaagcgctggcccgctcacgggtg
cccacggtgatcgccgtgtcttgcaacccggacagcttcgcccgcgacgcccgcctgctg
gccgccggcggctaccggctgcagcggatcacgccggttgatcagttcctgtggtccgca
cacctcgaactcgctgcctgcttccgccgctaa
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