Defluviicoccus sp. SSA4: HWD60_18510
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Entry
HWD60_18510 CDS
T06717
Name
(GenBank) ribonuclease HII
KO
K03470
ribonuclease HII [EC:
3.1.26.4
]
Organism
dex
Defluviicoccus sp. SSA4
Pathway
dex03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
dex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HWD60_18510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dex03032
]
HWD60_18510
Enzymes [BR:
dex01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
HWD60_18510
DNA replication proteins [BR:
dex03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
RNase H
HWD60_18510
Elongation factors (archaeal)
HWD60_18510
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_HII
Motif
Other DBs
NCBI-ProteinID:
QLH40526
LinkDB
All DBs
Position
3910434..3911186
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AA seq
250 aa
AA seq
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MPDFSLELEALEQHAXPALVCGVDEVGRGPWAGPVMAAAVVLDRARLPAELAATIDDSKR
IPAPRRRRIAEVLPEFACIGFGQASVDEIDRLNILQAALLAMCRAVEALCGVLGRTPEMA
LVDGARPPALPCPVRCVVRGDQRSLSIAAASIVAKVARDRLMVELGREFPGYGFEQHAGY
GTARHRDALLRLGPCRVHRRSFAPVRTALKQQSSPSPTMVVPPAQPVEPDDARDDALDAE
SAVAHSARHG
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgcccgatttctcgctggaattggaagcccttgagcagcacgccnncccggcgctcgtc
tgcggcgtcgacgaggtcggccgcgggccttgggccgggccggtaatggctgccgccgtg
gtcctggatcgcgcacgcctgccggcagagctggcagcgacgattgacgattcnaagcgc
attccggcgccgcggcgccggcgcatcgccgaagtcctgcccgagttcgcctgcatcggt
ttcggccaggcgagcgtggacgagatcgatcggctcaacatcctgcaggccgcgctgctg
gcgatgtgccgcgcggtggaagccctgtgcggcgtgcttggccggacgccggagatggcg
ctcgtcgacggtgcccggccgccggcgctgccgtgtccggtgcgctgcgtcgtccgtggc
gatcagcgcagcctgtcgatcgccgccgcctcgatcgttgccaaggtggcgcgggaccga
ctgatggtggaactggggcgngaattcccgggctatgggttcgagcagcatgccgggtac
ggcaccgcccgacaccgggacgcgctgctccgcctggggccgtgccgggtgcatcgccgc
agtttcgcaccggtacgaacggcgctgaagcagcagtcttcgccgtcaccgacgatggtg
gttccgcctgcacaaccggtcgaacccgacgacgcgcgtgacgatgcgcttgacgccgag
tcggcggttgcgcattctgcgcggcatggttga
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