Defluviicoccus sp. SSA4: HWD60_19100
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Entry
HWD60_19100 CDS
T06717
Name
(GenBank) rRNA pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
dex
Defluviicoccus sp. SSA4
Brite
KEGG Orthology (KO) [BR:
dex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dex03009
]
HWD60_19100
Enzymes [BR:
dex01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
HWD60_19100
Ribosome biogenesis [BR:
dex03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HWD60_19100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
QLH41225
UniProt:
A0A7D5S6B0
LinkDB
All DBs
Position
complement(4045305..4046105)
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AA seq
266 aa
AA seq
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MAKVIARAGLCSRRMAEQWIADGRVSVNGQRIESPALDVGNADVVMVDGALLPERQRPRL
WRYHKPAGLVTTHSDPQGRPTVFERLPAELGRVISVGRLDLTSEXLLLLTNDGALARRLE
LPSTGWTRRYRVRVHGTIDEAALARLQHGTTVDGVRYGPIDARFDRLQGSNAWLTLGLQE
GKNREVRKVLDSLGLPVNRLIRVAYGPFQLGNLERGGIAEVSPKVLREQLGNSPSGPNDS
RRGTKGSGPGGSKGGGKGGSKEVPAR
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atcgccaaggtaatcgcccgcgccggcctgtgctcgcgccggatggccgagcaatggatc
gcagacggccgggtcagcgtcaacggccaacggatcgagtcaccggcgctcgacgtgggc
aacgccgacgtggtgatggtggacggagcgctgctgccggaacgccagcggccgcggttg
tggcgctatcacaagccggccggactggtgacgacgcacagcgatccgcagggccggccc
acggtgttcgagcgtctgccggcggaactgggccgggttatttcggtcggccgcctcgat
ctgacctccgagnggctgctgctgctgaccaacgacggtgcgctggcgcgccgcctggag
ctgccgtccaccggctggacgcggcgctaccgggtgcgggtgcacggcacgattgacgag
gcggcgcttgcccgccttcagcacggcacgaccgtggacggcgtgcgctacgggccgatc
gacgcccgcttcgaccggctgcaaggcagcaacgcctggctgacgctgggactgcaggag
ggcaagaaccgggaggtgcgcaaggtgctggactcgctggggctgccggtcaaccggctg
atccgcgtcgcctacgggccgttccagctcggaaatcttgagcgcggcggcatcgcagag
gtctccccgaaggtgctgcgcgagcagctcggcaactcgccaagcggcccgaatgacagc
cggcgaggcaccaagggcagcggaccgggcggcagtaaaggcggcggcaagggcggtagc
aaagaagtgccggcccgatga
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