Defluviicoccus sp. SSA4: HWD60_19915
Help
Entry
HWD60_19915 CDS
T06717
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
dex
Defluviicoccus sp. SSA4
Pathway
dex03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HWD60_19915 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dex03400
]
HWD60_19915 (uvrB)
DNA repair and recombination proteins [BR:
dex03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HWD60_19915 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HWD60_19915 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
UVR
ResIII
DEAD
AAA_30
AAA_16
AAA_22
UB2H
Orbi_NS3
Motif
Other DBs
NCBI-ProteinID:
QLH41244
LinkDB
All DBs
Position
4217990..4220167
Genome browser
AA seq
725 aa
AA seq
DB search
MVAFLNPAIFMPAKRPPVPATRRFELASRYQPAGDQPAAIATLIDGVRQGERDQVLLGVT
GSGKTFTIANVIEAVQRPTLVLAPNKILAAQLYGEMKGFFPENAVEYFVSYYDYYQPEAY
VPRTDTYIAKDSSINEQIDRMRHAATRALLERNDVIIVASVSCIYGIGAVETYAEMVLTL
RPGQQIERKALLQRLVELQYKRNDLAFARGFFRAPGDVVEXFPSHLEDRAWKLSMFGDEI
EAIWEVDPLTGEKTGTLAEITIFPNSHYVTPRPTLQQAIPRIKTELKQTVDNFVEAGRLL
EAQRLQERTTYDLEMLETVGMCSGIENYSRYLTGRNPGEPPPTLFEYIPENALLVVDESH
VTVPQLGGMFRGDFQRKGTLAEFGFRLPSCVDNRPLKFEEWGQMRPQTIFVSATPGPWEL
EQTGGVIVEQVVRPTGLIDPLCIVRPVEHQVDDLMAECRAVAAAGQRVLVTTLTKRMAED
LTEYLHENAMRVRYLHSDVDTLERIEIIRDLRLGAFDILVGINLLREGLDIPECALVAIL
DADKEGYLRSKTSLIQTIGRAARNVDGRVILYADKITESLRYALDETERRRAKQQAYNEA
HGITPASIKSGISDVLQSVYEADYVTVXSGAAGEQQVVGKDLKTVIAELEKKMREAASNL
EFEDAARYRDEIRRLEVHELGLDKPGMAPHASALATSGPTGQAPRGGSSATRERPKQSRG
KRARR
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atggtcgcctttcttaatcccgccatcttcatgccggcgaaacgtccgccggtgccggcc
acccgccgcttcgagctcgcctcgcgctaccagccggcgggcgaccagccagcggcgatc
gcgaccctgatcgatggcgtgcgccagggcgagcgggaccaggtgctgctcggcgtgacc
gggtcgggcaagacgttcaccatcgccaacgtcatcgaggcggtgcagcggccgaccctg
gtgctggcgcccaacaagatcctcgccgcccagctctacggcgagatgaagggctttttc
ccggagaacgcggtcgagtacttcgtcagctactacgactactaccagcccgaggcctac
gttccgcgcaccgacacctacatcgccaaggattcgtcgatcaacgagcagatcgaccgg
atgcggcacgcggcgacgcgcgcgctgctggagcgcaacgacgtaattatcgtcgcgtcg
gtctcctgcatctacggcatcggcgcggtcgagacctacgccgagatggtgctgacattg
cgccccggccagcagatcgagcgcaaggcgctgctgcagcgcctggtcgagctgcagtac
aagcgcaacgatctggcgttcgcgcgcggcttcttccgcgcgccgggcgacgtcgttgag
atntttccctcgcacctggaagaccgggcctggaagctgtcgatgttcggcgacgagatc
gaggcgatctgggaggtcgatccgctcaccggcgagaaaaccggcacgctcgccgagatc
accatcttccccaacagccactatgtgacgccgcgcccgacgctgcagcaggcgatcccg
cgcatcaagaccgaactcaagcagaccgtcgacaacttcgtcgaggccggccggctgctg
gaagcacagcggctgcaggagcgcacgacgtacgacctggaaatgctggagacggtcggc
atgtgcagcggcattgagaactactcccgctacctcaccggccgcaatccgggcgagccg
ccgcccacgctgttcgaatacatccccgaaaacgcgctgctggtcgtcgacgaaagccac
gtcaccgtcccgcagttgggcggaatgttccgcggcgacttccagcgcaagggcacgctg
gctgaattcggcttccggctgccatcctgcgtcgacaaccggccgctgaagttcgaagaa
tgggggcagatgcgcccgcagacgatcttcgtctccgccacgccgggtccatgggagctg
gagcagaccggcggcgtcatcgtcgagcaggtggtgcgtccgacgggcctgatcgatccg
ctgtgcatcgtccgtccggtcgaacaccaggtcgacgacctgatggcggagtgccgggcg
gtcgccgccgccggccaacgggtgctcgtcaccacgctgaccaagcggatggccgaggac
ctgaccgaatacctgcacgagaacgccatgcgggtgcgctacctgcattcggacgtcgat
acgctggagcgcatcgagatcatccgcgacctgcggctgggcgccttcgacatcctggtc
ggcatcaacctgctgcgcgagggcctcgacatccccgaatgcgcgctggtcgccatcctc
gatgcggacaaggaaggctacctgcgctccaagacgtcgctgatccagaccatcggccgc
gccgcgcgcaacgtcgacggccgggtgatcctctatgcggacaagatcaccgagagcctg
cgctacgcactcgatgagacggagcgccgccgcgccaaacagcaggcctacaacgaggcg
cacggcatcacgcccgccagcatcaagtccggcatctccgacgtgctgcagagcgtctac
gaggccgactacgtcaccgtcgantctggcgccgcgggcgagcagcaggtggtcggcaag
gacctgaagacggtgatcgccgagctggaaaagaagatgcgcgaggccgcctcgaacctg
gaattcgaggacgcggcacggtaccgcgacgaaatccgccgcctggaagtacacgaactc
ggccttgacaagcccggcatggcgccgcacgcctccgctctggcaacaagtgggccgacc
gggcaggcgccgcggggcgggagcagcgcaacgcgggaaaggccgaagcagtcccggggc
aaacgcgcgcggcgataa
DBGET
integrated database retrieval system
