Defluviicoccus sp. SSA4: HWD60_20055
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Entry
HWD60_20055 CDS
T06717
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03089
RNA polymerase sigma-32 factor
Organism
dex
Defluviicoccus sp. SSA4
Brite
KEGG Orthology (KO) [BR:
dex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dex03021
]
HWD60_20055
Transcription machinery [BR:
dex03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HWD60_20055
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
QLH41247
LinkDB
All DBs
Position
complement(4251029..4251844)
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AA seq
271 aa
AA seq
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MQNPLIAEAGRHPLLARDEEVELARRAEAGDGEALRRLVGSHLRYVIKIARRYRGWGLPM
NELIQQGTLGLVQAVRRFDPERGVRLSTYAMWPIRQAIQEYVLQSWSAVRLGTSNAQRML
ALKLRSILLDLAGGDAWPDDDRLALLARQFNATTSEVTRLARRMTGRDSSLDLPASTGAX
TPLDHLESGLPSPEQVVADRGVQRLLSAALAALTPREQLVIHRRYLESAKGTFETIGQEL
GVSKDRARQLEKRXLAKLQELLQPLRREAAL
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
gtgcagaatccgttaatcgccgaggccgggcggcatccgctgctcgcccgcgacgaagag
gtcgagctggcacgccgcgccgaggcgggcgacggtgaggcgctgcgtcgcctcgtcggc
agtcacctgcgttatgtcatcaagattgcccggcggtatcgaggctggggcctgccgatg
aacgaactgatccagcagggcacgctcgggctggtgcaggcggtccgccgcttcgatccc
gaacgtggcgtgcggctgtcgacctacgcaatgtggccgattcgccaggcaatccaggaa
tacgtcctgcagtcctggtcggcggtgcggctgggcaccagcaatgcgcagcgcatgctg
gcgctgaagcttcgcagcatcctcctcgaccttgcaggcggagacgcgtggccagacgat
gatcgcctcgcactcctcgcgcgacagttcaacgccaccacgtccgaggtcacgcggctt
gcccgcaggatgacgggacgggacagctcgctcgaccttccagcgagcacgggggcanta
acgcctctcgatcacctggaaagcggtttgccgtcaccggaacaagtcgtggcggacagg
ggcgtgcagcgtctgctcagtgccgcactggcggcgctcaccccgcgggaacagctcgtt
attcacagacgctatctggaaagcgccaaaggcacgttcgaaacgatcggccaggaactg
ggggtatcaaaggatcgtgcccggcagctggagaaaaggncgctcgcgaaactgcaagag
ctgctgcagcccctgcgccgggaagcggcgctctga
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