Dechloromonas sp. HYN0024: HYN24_00160
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Entry
HYN24_00160 CDS
T05616
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
dey
Dechloromonas sp. HYN0024
Pathway
dey03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dey00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HYN24_00160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dey03400
]
HYN24_00160
Enzymes [BR:
dey01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HYN24_00160
DNA repair and recombination proteins [BR:
dey03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HYN24_00160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
AAA_33
Zot
Motif
Other DBs
NCBI-ProteinID:
AXS78587
LinkDB
All DBs
Position
35169..37151
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AA seq
660 aa
AA seq
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MPVLRVALDLPLHRLFDYVAEAASTIDVGRRVRVPFGRGEKLGVIVDVVDASDWPLDQLK
AAGEILSDLPPLPADFFRLCEFASAYYQAALGEVILQALPVGLKRLDPPARRSGRASRKV
DPIQPPALTEEQKTALAAIDFAAGFSVHLLHGVTGSGKTEVYLRLVEEALAAGRQALLLV
PEINLTPQLEGRVRARFPEAGVVSLHSELAEAARERNWRAAFAGEANIILGTRLSIFTPL
PRLGLIVIDEEHDPSFKQQDGMRYSARDVGVFRAHQLGIPILLGSATPSLESWANAQSRR
YGLLCLHQRANPEATLPIVHVLDTRKMVLKEGVSEPLIAAIKERLARREQSLVFLNRRGY
APVLACPACGWVSRCTRCAANMVLHLADRRLRCHHCGCEHRVPKACPTCGNQDIHPFGRG
TQRLEVWLQEQFPDARILRVDRDSVKSRKQWETMLELIHGGEADILVGTQMLAKGHDFPR
LTLVGALGADAALYAADWRAPERLFAQLMQVAGRAGRAELKGEVLIQTEYPDHPLFAALT
DHDYPRFAAQQLKEREQAGFPPYAFQAVLRAEAPEMADSIAFLAAAAELSVVGEHEKVMI
YDPVPMRLARLASLERGQLLAESYSRPALQNFLPCWREAIEGLKAPSKLRWHIEVDPLEF
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgcccgttttgcgcgtcgccctcgatttgcccttgcatcgccttttcgattatgtggct
gaggcagcctcgaccatcgatgtcggccgccgggttagagttccatttgggcggggagag
aaacttggcgtaatcgttgatgtcgtcgacgccagtgactggccgctcgatcaactcaag
gcagccggcgaaatcctcagtgatttgccacccttgccagccgatttcttccgtctatgt
gagtttgcaagcgcttactaccaggcggcgctcggtgaagtgattcttcaggccttgcct
gtcggactcaagcgcctcgatcccccggcccgacgaagcggccgggccagccgaaaagtc
gatccgattcagcctccggccctgaccgaggagcaaaagactgccctggcggccatagat
ttcgcggccggcttttcggtacatctgctgcatggcgttacggggagtggcaagaccgag
gtttatctccggctcgttgaagaggcgctggctgccggtcggcaggccttgttgctggtt
cctgaaatcaatctgacaccgcaactcgaaggccgggtacgggcccgctttcccgaggcc
ggggtcgtctccctacatagcgaactggccgaagcggcgcgtgagcgcaactggcgggcc
gcctttgccggcgaagcgaacatcattctcggcacccggctttcgatttttacgcccctg
ccacgccttggccttatcgttatcgatgaggagcatgatccttccttcaagcagcaggat
ggcatgcgctattcggcccgcgacgtcggcgtctttcgtgcgcaccagcttggcatccca
attctgctgggttcggcgacgccgtcgctggagtcttgggccaatgcgcagagccgtcgc
tacggcttgctgtgccttcatcagcgggcaaatccggaggcaacgctgcccatcgtccac
gttctggatacccggaaaatggtgctcaaggagggggtcagtgagccactgatcgcggcc
atcaaggagcgccttgcccgtcgcgagcaaagcctggtattcctcaatcgtcgcggctat
gcgccagtgttggcatgtcccgcctgtggctgggtgtcgcgctgcacgcgctgtgctgcc
aacatggtgctgcatctggccgatcgccgcttgcgctgtcatcactgtggttgcgaacac
cgcgtgccgaaggcctgcccgacctgcggcaatcaggacattcatccgtttgggcggggg
acgcagcgtctcgaagtgtggttgcaggagcagtttcccgacgcgcgtatcctgcgcgtc
gaccgcgattcagtaaaaagccgcaagcagtgggaaacgatgcttgaattgattcatggt
ggcgaagccgacattctggtcggtacccagatgctggccaaaggacatgactttccccgg
ctgacgttggtcggtgcactgggcgccgatgctgccctttatgccgccgactggcgggca
ccggaacgactgtttgcccaattgatgcaagtggccggccgggcagggcgggcggaattg
aaaggggaggtgctgatccagaccgagtatccggatcatcccctgttcgccgcgctgact
gaccacgactatccacgttttgctgcccagcagctcaaggagcgcgagcaggcggggttc
ccgccctatgctttccaggccgtgctgcgcgccgaagcaccggaaatggccgattcaatc
gccttcctggcggctgccgccgagttgtcggtggtcggtgagcatgaaaaagtcatgatt
tatgatccggtaccgatgcgactggcccggctggccagtctggagcgcggccaattgctc
gctgaatcctattcccggccagccttgcagaattttctcccatgctggcgggaagccatc
gagggcctcaaggccccctcaaagctccgttggcacatcgaggtagatccgctcgagttt
tga
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