Dechloromonas sp. HYN0024: HYN24_00270
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Entry
HYN24_00270 CDS
T05616
Symbol
selB
Name
(GenBank) selenocysteine-specific translation elongation factor
KO
K03833
selenocysteine-specific elongation factor
Organism
dey
Dechloromonas sp. HYN0024
Brite
KEGG Orthology (KO) [BR:
dey00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
dey03012
]
HYN24_00270 (selB)
Translation factors [BR:
dey03012
]
Eukaryotic type
Elongation factors
HYN24_00270 (selB)
Prokaryotic type
HYN24_00270 (selB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
Beta-barrel_SelB
WHD_2nd_SelB
WHD_3rd_SelB
GTP_EFTU_D2
MMR_HSR1
WHD_2nd_SelB_bact
PduV-EutP
FeoB_N
SRPRB
HTH_20
Motif
Other DBs
NCBI-ProteinID:
AXS78607
LinkDB
All DBs
Position
62393..64270
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AA seq
625 aa
AA seq
DB search
MIIGTAGHIDHGKTTLVKALTGVDCDRLKEEKTRGITVDLGYAYTPTLGFIDVPGHEKLI
HNMLAGATGIDFALLVIAVDDGPMPQTREHLEIIELLGIRRGAVALTKIDLAGADRAKQA
GAEIATLLVGTALAAAPVFPVAAVSGEGIAELRAHLEAAAAEQGQRQSAGGFRLAIDRCF
TLSGAGTVVTGTAFAGTVKAGDQLLLSPPNKSVRVRSLRVQDAPAESGQAGQRIALALNG
IEKAEVERGQWIVASPLHAPVRRVDARVRVLAGQPVLKHWTQVHLHLGAEDVPARIALLG
ANELAPGSEQWAQIALERDIGTLAGDRFILRDASARHTIGGGIVLDIFPPSRRKSSPERL
AMLAALADDNPATALQLASDQQAAGIDLTMYALNRNLDATTLAALCQQLNLRQVGQTAFS
PSRWQDLEARLLTALAAEHQRAPDLTGVERDRLRRLTLPTLSRPAFDALLAKPLADGRIT
QSNAWLHLPEHRVELAAADRELWQVLKPLLDSEPYAPPRVRDVAKAAGIGEDAVRGLFKR
MARHGEAWPVAHDHYFTAVAVADLARRVAGLNERDSCARAATLRDEIGGGRKVAIHILEF
FDRIGYTRRVRDTHVLRGTPEQFGA
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgatcatcggtacagccggccatatcgaccatggcaaaacgacgctggtcaaggcgcta
accggcgttgactgcgatcgtctgaaggaagaaaagacacgcggtatcaccgtcgacctc
ggttatgcctatacgccgaccttgggtttcatcgacgtaccaggccatgaaaagctcatt
cacaacatgctggccggggccaccggcatcgattttgccctgctcgtgattgctgttgac
gacggtccgatgccacagacccgtgagcatctggaaattatcgaactgctcgggatcagg
cgaggcgccgtggcgctgaccaagatcgacctggccggcgccgaccgggccaagcaggcc
ggcgccgaaattgccaccttgctggtcggcaccgcattggctgcagcgccggtctttccg
gtcgccgccgtgagtggcgaagggatcgctgagttgcgtgcccatcttgaagcggcggct
gcagaacaaggccaacgccagtccgccggtggctttcgtctcgccattgatcgttgcttc
acgctttccggtgcaggcacggtggtaaccggcacggcctttgccggcacggtcaaagct
ggcgatcagttgttgctctcgccgcccaataaatctgtccgggtgcgcagcctgcgcgtt
caggatgctccggctgaatccggtcaggcagggcagcgtatcgccctggccctgaacggg
atcgaaaaggccgaggttgaacgtggtcagtggattgtcgcgtcgcccttgcatgctccg
gtccgccgcgttgacgccagggttcgcgtcctcgccggtcagcccgtcctcaagcactgg
acccaggtacaccttcacctcggggcggaagatgtgccggctcgtatcgccctgcttggt
gccaacgagcttgcgccggggagcgagcagtgggcccagattgcccttgagcgcgacatc
ggcacgctggccggcgaccgcttcatcctgcgcgatgcctcggcccgtcacaccattggc
ggcggcatcgtcctcgatatcttcccgcccagtcgccgaaagagcagcccggagcggctg
gccatgctggctgcactggctgatgacaacccggctacggcactgcaactggccagcgac
cagcaagcggccggcatcgatctgacgatgtacgcattgaaccggaacctggacgcgacg
acgctggccgctttgtgccagcaattgaatctcaggcaggtcgggcaaactgctttttcc
ccgtcccgctggcaagaccttgaagcccggctgctcacggcactggcagcagaacaccag
cgggcacccgacctcaccggggtcgagcgcgaccgcctacgtcgtctgaccctgccgacg
ctttcccgcccggcattcgacgcattgctggccaagccgctggccgatggccgtatcact
cagagcaatgcctggctgcatctgccggaacaccgggtcgagctggcggctgctgaccgc
gagttgtggcaagtgctgaagccgctgcttgatagtgaaccctatgcgccgccgcgtgtg
cgcgatgtcgccaaggctgcgggtattggcgaagatgccgtccgtgggttgttcaagcgc
atggcccgtcacggtgaagcctggccggtggcacacgaccattactttacggccgtagcc
gtcgccgacctggcgcggcgggtggctggcctcaacgaacgagacagctgcgcccgggcc
gccacgttgcgtgacgaaatcggtggtggtcgcaaagttgccatccacatcctcgaattc
tttgaccgcatcggctacactcgccgcgtgcgtgatacccacgttttgcgtggaaccccc
gagcagtttggggcatga
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