Dechloromonas sp. HYN0024: HYN24_00645
Help
Entry
HYN24_00645 CDS
T05616
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
dey
Dechloromonas sp. HYN0024
Pathway
dey03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dey00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HYN24_00645 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dey03400
]
HYN24_00645 (xth)
Enzymes [BR:
dey01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
HYN24_00645 (xth)
DNA repair and recombination proteins [BR:
dey03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
HYN24_00645 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
DUF5648
Motif
Other DBs
NCBI-ProteinID:
AXS78675
LinkDB
All DBs
Position
133043..133822
Genome browser
AA seq
259 aa
AA seq
DB search
MLRIISLNLNGIRSAWSKNVLPWVISQQPDIICLQELKAQLPDLTPEMMAPDGMRAFYHC
AEKKGYSGVGIWSRQAPDRVIEGFDGGEFDAEGRYIRADFGNLSVISLYLPSGSSSPERQ
EAKFRFLDVFYPQMLALRAEGREIVLCGDWNIAHQAIDLKNWKSNQKNSGFLPEERAWLG
RLFDEQGWVDVYRRLYPDAGEACYTWWSNRGQAWAKNVGWRIDYQIATPGIAATAVNAEV
YKAERFSDHAPLIIDYDYK
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgttacgcatcatctccctgaatctcaatggtatccgctctgcctggagcaaaaatgtg
ctgccctgggtcatttcgcagcagcccgacatcatctgtctgcaggaactgaaagcccag
ttgcccgatttgacgccggaaatgatggcgcccgatggcatgcgggcgttctatcactgc
gccgaaaagaagggatatagcggcgttggtatctggagtcgtcaggcccccgaccgggtc
atagaaggctttgacggtggcgagtttgatgccgagggtcgttatatccgggcggatttt
ggaaatctgtcggtgatttcgctctatttgccatcgggctcgtcgtcgcccgagcgccag
gaagccaaattccgcttcctggatgtgttctatcctcagatgctggccttgcgcgccgag
ggccgggaaattgtcctatgtggtgactggaatatcgcgcatcaggccatcgaccttaaa
aactggaaatcgaaccagaaaaactcgggtttcctgcctgaggagcgcgcctggttgggc
cgtctctttgatgagcagggctgggtcgacgtctatcggcgactgtatccggatgccggc
gaagcctgttatacgtggtggagcaatcgcggccaggcctgggccaagaatgtcgggtgg
cgaatcgactaccagattgccaccccgggcattgccgcaacggccgtgaacgctgaagtc
tacaaggccgagcgattttccgaccatgcgcctctaatcattgactacgactacaaataa
DBGET
integrated database retrieval system
