Dechloromonas sp. HYN0024: HYN24_02430
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Entry
HYN24_02430 CDS
T05616
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
dey
Dechloromonas sp. HYN0024
Pathway
dey03030
DNA replication
dey03430
Mismatch repair
dey03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dey00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HYN24_02430
03430 Mismatch repair
HYN24_02430
03440 Homologous recombination
HYN24_02430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dey03032
]
HYN24_02430
03400 DNA repair and recombination proteins [BR:
dey03400
]
HYN24_02430
Enzymes [BR:
dey01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HYN24_02430
DNA replication proteins [BR:
dey03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HYN24_02430
DNA repair and recombination proteins [BR:
dey03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HYN24_02430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
HROB
Motif
Other DBs
NCBI-ProteinID:
AXS78991
LinkDB
All DBs
Position
487209..490685
Genome browser
AA seq
1158 aa
AA seq
DB search
MAPMNSPRYVHLRLHSEYSVTDGIVRIGDAVKRAAGDGMPAMALTDLGNLFGLVKFYTGA
RGKGVKPIAGADVWIANPESPEDAYRLLLLARNRRGYQQLCELLTRAYLVEGRRDRAEIH
RDWFGEVGSDGLIALSGAHLGDVGEALLNGNFDLAGERAKSWEAMFPGAFYLEVQRYGQA
QQEAIVQQTADLAGETGIPLVATHPIQFMNRDDFRAHEARVCIAEGYVLGDTRRPKTYTE
EQYFKTQAEMAELFADLPEALENSLEIARRCNIEMTLGKNFLPDFPIPPGMTIDEFLVDE
AKKGLEVRLAELYPDPEERLKRRPEYDDRLVFECNTIVQMGFPGYFLIVADFINWAKNNG
VPVGPGRGSGAGSLVAYSLRITDLDPLAYALLFERFLNPERVSMPDFDIDFCQDNRWRVI
EYVRGHYGADAVSQIATFGTMSSKAVIRDVGRVFGMPYSMCDRISKLIPIVQNKPVSLAE
ALEQEPQLKEMMQGDGDGETIRELFDLASRLEDLTRNVGMHAGGVLIAPGKITDFCPIYQ
ATGSDASPVSQFDKDDVEKAGLVKFDFLGLRNLTIIELAVEYIRRMTGEKLDLMSLGFTD
PAAYQILKDANTTAIFQVESEGMKKLLKKLAPDRFEDIIAVLALYRPGPLGSGMVDDFIL
RKKGQQKIDYFHPDLTACLSPTYGVIVYQEQVMQISQIIGGYTLGGADMLRRAMGKKKAE
EMALHRETIAAGAKEKGYDPKLAEQLFDLMTKFAEYGFNKSHTAAYAVVTYHTAWLKAHH
CAAFMAATMSSDLDNTDSVKIFYEDTIANKIKVLGPDVNVSNYRFEPVDRSTIRYGLGAV
KGTGEQAVNVILKARETDGPFKDLFDFCQRCDKRMVNRRTIEALIKAGAFDAIAPEIAPG
QGADRCKLLATVGIAMDFAEQTERNAMQTSLFDMPDVAEEHAPEYIAVRPWDEKTRLMEE
KTALGFFFSGHPYNTCKKELSRFVRRPLNRLEPAKELTTLAGVVVGVRTQMTRRGKMLFV
QLDDGTGMIEVTVFNELFEAERAKIVTDEVLIIEGKVRYDDFSGGNSVTAEKLMTLGEAR
ARFAKHLLLKMNGNSDARKLKSLLTPFAPGPAAVRVRYRNADAECELVLGNALRVRLDDP
LLEALHGWLQPENVEIVY
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
attgcgcccatgaattccccccgctacgtccacctccgcctccattccgaatactccgtc
accgatggcatcgtgcgcattggcgatgccgtcaagcgggcggccggggatggcatgccg
gcgatggcgctgactgatctcggcaatctgttcgggctggtcaagttctacaccggggcg
cgcggcaagggggtcaagccgattgccggggcggatgtgtggattgccaacccggagtcg
ccggaagatgcctatcgccttctcctgctggcccgcaatcggcgtggctatcagcagctg
tgcgaattgctgacccgcgcctatctggtcgaaggccggcgcgaccgggcggaaattcac
cgcgactggtttggcgaggttgggagcgatggtttgattgccctctccggcgcgcatttg
ggtgatgtcggcgaagccttgctcaacggcaatttcgatctggccggtgagcgggcgaag
tcctgggaagcgatgttccccggtgctttctatctcgaagtgcagcgttacgggcaagcc
cagcaggaggcgattgtccagcagaccgccgatctggctggcgagacggggattccgctg
gttgccacgcacccgatccagttcatgaaccgcgacgacttccgcgcccacgaagcacgg
gtctgcatcgccgagggctacgtgctgggtgatacgcggcggccaaaaacctataccgag
gagcagtatttcaagacgcaggccgagatggccgagctgtttgccgatctgcccgaggcg
ctggaaaattcgctggaaattgcccgtcggtgcaatatcgaaatgacgctgggcaagaac
ttcctgcctgatttcccgattccgccgggcatgaccatcgacgaatttctcgtcgacgag
gcgaagaaggggctggaggtccgcctcgcggagttgtatcccgatcccgaagagcgcctg
aagcgccggccggaatacgacgaccgcctggttttcgagtgcaataccattgtccagatg
ggcttccccggctacttcctgatcgtggccgactttatcaactgggccaagaacaacggc
gtcccggttggtcccggccggggttcaggcgcgggctcgctggtcgcctacagtctgcgc
attaccgacctcgatccgctcgcctacgcgctcctttttgagcgcttcctcaacccggaa
cgggtgtcgatgcccgacttcgacatcgacttctgtcaggacaaccgctggcgcgtcatt
gaatacgtgcgcggccattacggcgccgatgcggtgagccagatcgccaccttcggcacc
atgtcctcgaaggcggtgatccgcgacgtcgggcgcgttttcggcatgccctattcgatg
tgcgaccggatttcgaagctcatcccgatcgtccagaacaagcccgtttcgctcgccgag
gcgctcgaacaggagccgcagctcaaggagatgatgcagggcgacggcgacggcgaaacc
atccgcgaactgttcgacctggccagccgccttgaggacttgacgcgcaatgtcggcatg
cacgccggcggcgtacttattgcgcccggcaagatcaccgacttttgcccgatttatcag
gccaccggcagcgatgcctcgcccgtctcgcagttcgacaaggatgacgttgaaaaggcc
ggcctcgtcaaattcgacttcctgggcctgcgcaacctgacgattatcgagctggcggtc
gaatacattcgccggatgaccggcgagaagctcgacctcatgtcgctcggcttcaccgac
ccggcggcttaccagattctcaaggacgccaatacgacggcgatcttccaggttgaatcg
gagggcatgaagaagctcctgaagaagctggcgcccgaccgtttcgaagacatcatcgct
gtgctcgcgctctatcgtcccggcccgctcggttccggcatggtcgacgacttcatcctg
cgaaagaagggccagcagaaaatcgactatttccaccccgacctgaccgcttgcctgtcg
ccgacctacggcgtcatcgtgtaccaggaacaggtgatgcagatctcgcagatcatcggc
ggctacacgctgggtggtgccgacatgctgcggcgggcgatgggcaagaagaaggccgag
gaaatggccctgcaccgcgagaccatcgcggccggggccaaggaaaagggttacgacccc
aaactcgccgagcagttgttcgacctgatgaccaagttcgcggaatacggcttcaacaag
tcgcacaccgccgcctacgccgttgtcacctatcacaccgcctggctcaaggcccaccac
tgcgccgccttcatggcggcgacgatgtcctccgacctcgataacaccgattcggtgaag
atcttttacgaagacaccatcgccaacaagatcaaggtgctcgggccggacgtcaatgtc
tcgaattaccgtttcgagccggtcgatcgcagcaccatccgctacggtctgggggcggtc
aagggcaccggcgagcaggccgtcaatgtgatcctcaaggcccgcgagacggacgggccg
ttcaaggacctcttcgatttttgccagcggtgcgacaagcgcatggtcaatcgccgcacc
atcgaggccctgatcaaggccggcgccttcgacgccatcgcacccgagatcgcacccggt
cagggagccgaccgctgcaagctgctggcgacggtgggcattgccatggactttgccgag
cagaccgaacgcaatgccatgcagaccagcctgttcgacatgcccgacgtggccgaggag
catgcgccggaatacattgctgttcggccctgggacgaaaagacccggctcatggaggag
aagacggcgctcgggtttttcttttcagggcacccctacaatacctgcaagaaagaactg
tcgcgctttgttcggcggccactcaaccgactcgagccggccaaggaacttacgacgctg
gccggtgtcgtggttggcgtgcggacccagatgacccggcgcggcaagatgcttttcgtg
cagcttgacgatggcaccggcatgatcgaggtgaccgtcttcaacgagttgttcgaggcc
gagcgggccaagattgtcactgatgaagtgctgatcattgaaggcaaggtccgctacgac
gatttttccggtggcaacagcgtgactgccgagaagttgatgacgctgggcgaagcccgt
gcccgcttcgccaagcatctgctgctcaagatgaacggcaattcggatgcccgcaagctg
aagtctctgctgacgccctttgcgccggggccggctgctgtacgggtgcgctatcgcaat
gccgatgccgagtgcgaactggtgcttggtaatgcgctgcgcgtccgcctcgacgatccc
ttgctcgaagccttgcacggctggctacagccggaaaacgtcgaaatcgtctattag
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