Dechloromonas sp. HYN0024: HYN24_02975
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Entry
HYN24_02975 CDS
T05616
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
dey
Dechloromonas sp. HYN0024
Brite
KEGG Orthology (KO) [BR:
dey00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dey03000
]
HYN24_02975
Transcription factors [BR:
dey03000
]
Prokaryotic type
Helix-turn-helix
Other families
HYN24_02975
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
HTH_8
GAF
Mg_chelatase
PAS_4
PAS
HTH_30
AAA_5
HTH_28
AAA_2
HTH_7
HTH_22
PAS_9
Xre-like-HTH
RsmI_C
HTH_23
PAS_2
SLFN-g3_helicase
AAA_3
Motif
Other DBs
NCBI-ProteinID:
AXS81393
LinkDB
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Position
complement(603412..605394)
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AA seq
660 aa
AA seq
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MEQLQLATELNGQRLQRARQLFFDEGYVPDGLIDPIILRSWQRCRHFGLNENNIIPATEG
MDLPTLKAERNRNRFLLAQGRPIMEHIYEQIRKSGSMVILADANGLLLETIGDSDFVYRA
DRVALTSGASWGEPHRGTNAIGTAITEKSPVSTIGGEHFFERNSFLTCSASPIFGPDGCL
VGVLDISSDYRNYHQHTLGLVCMSTAIVERRLFESAYSRDLLVCFHTRSDYLGSPKEGIA
AVSPDGQILAINRNGTELLGIRQEDAVNRDFSLVFKSNLSTLIDRLRHAPQRRLEINTNG
KFLFFQLRGQFPSLAIASRIEDAQAIMPMANSPEAISPSGPTLDTLSDGDPLLQAAIERA
RRMLGKDIPILIQGESGAGKEMFAKAFHNSGPRSRGPFVALNCASIPETLIESELFGYQG
GAFTGARKEGAPGKIQQAHGGTLFLDEIGDMPHNLQARLLRVLQERCVTPLGSTRAIQVD
ISLVCATHRKLRDEVARGHFREDLYYRLNGMSVTIPPLRERTDIQSLVAKITATETTHRG
LQVYFSEEAQHAIKRYSWPGNIRQLFNVIRVAIALLDDDESLITENHLPEELFEPAKASR
HPRRTFQPRIEAPPSDVMSMDAIGRQAAINALESAGGNVTLAARHLGISRNTLYRKLGRT
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggagcaacttcaactagcaaccgaattgaacggccagaggctacaaagggctaggcaa
ctctttttcgatgaaggctacgttcctgacgggctgattgacccgatcatcctccgctcg
tggcagcgctgccggcatttcggtctgaacgaaaacaatatcattccagctacagagggg
atggatctccctaccctcaaagccgaacggaatcggaatcgctttctgctcgctcagggg
cgaccgatcatggaacatatctacgaacagattcgaaaatccgggagcatggtaattttg
gccgatgccaacggactcctacttgaaacgattggcgattccgactttgtttaccgcgca
gaccgtgtcgcactgacatcaggggcatcatggggggagcctcatcgcggcaccaatgca
atcggcaccgccatcacagaaaaaagccccgtatccactattggaggagagcatttcttt
gagcggaacagcttccttacctgctcagccagcccgattttcggaccagatggatgtttg
gttggagttctcgatatttctagcgactatcgcaactaccaccaacatacccttggctta
gtctgcatgtcgactgccattgtggaacggcgactgttcgaatccgcatactcccgtgac
cttctggtctgtttccataccagaagtgattacctgggtagtccaaaagaaggaatcgca
gcagtttctccagatggccagatactagccataaatcggaatggcaccgaactccttggt
attcgccaagaggatgctgtgaatcgcgacttttcgctggtctttaaaagcaacctgtcg
accttgattgatcgattacgtcacgcacctcaacgtcgattagaaatcaacaccaacggc
aaattcctgttcttccagcttcgtggccagttcccttcactggctatcgctagccgcatc
gaagatgcccaggcaatcatgcccatggctaacagccccgaagcaatctcgccatcaggt
ccgacgctggatacgctgagcgacggcgaccccctcctacaagccgcgattgagcgtgcc
cggcggatgcttggcaaggatattccgattctgattcaaggtgaatctggtgccggcaag
gaaatgtttgctaaagcgttccacaacagtgggccacgtagcaggggcccatttgtcgca
ttgaattgtgcctctattcccgaaacattgatcgagtccgaactgttcggctatcagggg
ggggctttcaccggggctcgcaaggaaggcgcgcctggcaaaatccagcaggcacatggt
ggaacgctgttcctcgacgaaattggcgacatgccacacaacttgcaggcccgcctgctt
cgcgtcctgcaggaacgctgcgtcacgcccctcggtagcactcgcgcaatacaggttgat
atttcgctggtttgcgccacccaccgaaaactgcgtgacgaagttgcgaggggacacttt
cgggaagatctttattaccgcctgaatggtatgagcgtcaccataccgcctttaagggaa
cggaccgacattcagtcgttggtagccaaaatcacagcaaccgaaacgacacatcgcggg
ctgcaggtctatttttccgaagaggcccagcatgccatcaaacgctattcctggccgggc
aatattcgccagttgttcaatgtaatccgtgtcgccattgcgctacttgacgacgatgag
tcgctgatcacagaaaatcacctacccgaagagctgttcgaacccgctaaggcatctcgg
caccctcggcgcacttttcagccaagaatcgaggcaccaccatcggatgtcatgagcatg
gacgccatcggccgtcaagccgccataaatgcacttgaatcagcaggcggcaacgtaacc
ctggcagcccgccaccttggcatcagccggaatacgttgtaccgcaagctaggacgaact
tag
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