Dechloromonas sp. HYN0024: HYN24_03400
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Entry
HYN24_03400 CDS
T05616
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
dey
Dechloromonas sp. HYN0024
Pathway
dey02020
Two-component system
dey02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
dey00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HYN24_03400
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
HYN24_03400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dey03021
]
HYN24_03400
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
dey02035
]
HYN24_03400
Transcription machinery [BR:
dey03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HYN24_03400
Bacterial motility proteins [BR:
dey02035
]
Flagellar system
Flagellar assembly proteins
Stator
HYN24_03400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
UPF0122
PilB3_C
Motif
Other DBs
NCBI-ProteinID:
AXS79162
LinkDB
All DBs
Position
709827..710579
Genome browser
AA seq
250 aa
AA seq
DB search
MYTAAGQPDRDQLVQRFMPLVKRIAYHLMARLPPSVQFDDLVQNGMLGLLDAIDRYQEGF
GAQFETYASQRIRGSMLDGLRENDWLPRNLRRELRRIETTINQLEHEHGRAPSEQELADA
LGMTLAEYQRTLQDARGHQIVYFEDFSGSDDEDFLERHFTDNDADPVSILEDRGVKEQLV
QAISLLPEREKLMMALYYEQDLNFREIGEVMGVTESRVCQLHTQAIARLRSRIVPEVPAA
MKRRKEKAGG
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgtataccgctgccgggcagcctgacagggaccagctggttcagcgcttcatgccgctg
gtgaagcgtatcgcctatcacctgatggcccggctgccgcccagtgtccagtttgatgat
cttgtccagaacgggatgcttggtttgctggatgccatcgaccgctatcaggagggtttc
ggcgcgcagtttgaaacctatgccagccagcggattcgcggttccatgctcgatggcttg
cgggaaaacgactggttgccacggaatttgcggcgggagttgcggcgcattgaaacaacc
atcaaccagcttgagcacgaacatggccgggcgccatccgagcaggaactggctgacgcg
ctgggcatgacactggctgagtatcagcggacgctgcaggatgcacgtggccaccagatc
gtatattttgaggacttttccggttcggatgacgaggactttctcgaacgccactttacg
gataatgatgccgacccggtgagcattcttgaagatcgcggcgtcaaggagcaattggtg
caggctatcagcctgctgccggagcgtgaaaaactgatgatggctttgtactatgagcag
gatctgaatttccgggagatcggggaagtcatgggcgtcaccgagtcgcgggtctgccag
ttgcatacccaggctatcgcccgcctgcgtagccgtatcgtcccggaagttcccgctgcc
atgaaacgtcgcaaggagaaggccggtggataa
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