Dechloromonas sp. HYN0024: HYN24_03560
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Entry
HYN24_03560 CDS
T05616
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
dey
Dechloromonas sp. HYN0024
Pathway
dey02020
Two-component system
dey02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
dey00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HYN24_03560
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
HYN24_03560
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
dey02022
]
HYN24_03560
02035 Bacterial motility proteins [BR:
dey02035
]
HYN24_03560
Two-component system [BR:
dey02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
HYN24_03560
Bacterial motility proteins [BR:
dey02035
]
Flagellar system
Flagellar assembly proteins
Others
HYN24_03560
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
AAA_2
AAA_16
HTH_50
HTH_30
Mg_chelatase
nSTAND3
HTH_23
AAA
HTH_28
AAA_3
AAA_22
AAA_19
FleQ
HutF_N
MCM
Motif
Other DBs
NCBI-ProteinID:
AXS79192
LinkDB
All DBs
Position
737210..738571
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AA seq
453 aa
AA seq
DB search
MAEHSLPILVVEDDPSLREAIGDTLELAGRPYVAVDGGEAALAALGEQAFSIVVSDVRMM
PMDGIALLKEIRARLPHLPVVLMTAYAEVDKAVDAMRSGACDFLLKPFEPKALLAHINKY
ELPDTDDGGGVVAIDPASRDLFAIAQRVAQTDATVLLTGESGVGKEVVARFIHRQSARRE
GPFVAINCAAIPDSLLEATLFGYEKGAFTGAQQAQAGKFEQAQDGTLLLDEVTEMPMGLQ
AKLLRVLQEREVERVGGKKPVALNIRIVATSNRDMAEAVAKGVFREDLYYRLNVFPVAIP
PLRERPLDIVPIARYFLVEHGGRFGRSGVGFGPAAEQALLRHGWPGNVRELENVIQRALI
LSTGAEIGVDNLRLAPAPTSPQAGEVSRPASEAPLLESDKRLDNMKDIEREHILRTLAEV
GGSRKMAIERLGISERTLRYKLQQYRDEGFFKD
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggctgaacatagtttgcccattcttgttgtcgaagatgatcccagtctgcgtgaggcg
attggcgatacgctcgagcttgcaggccgcccgtatgtcgccgttgatggtggcgaggct
gcgctggcggcgctgggcgaacaggctttctcgattgtcgtcagcgatgtgcggatgatg
ccgatggatggcattgccttgctcaaggaaatccgggcccgcctgccccatctgccggtg
gtcctcatgacggcttacgccgaggtggacaaggcggtcgacgccatgcgttccggggcc
tgcgatttcctgctcaagccgtttgagccgaaggccttgctggcacatatcaacaaatac
gagttgccggataccgatgatggcggtggtgtggttgccatcgatccggccagccgtgac
ctgtttgctatcgcccagcgcgtcgcccagaccgatgcgacagttcttctgaccggagag
tcaggggttggcaaggaagtggtcgctcgcttcattcatcgccagtcggcccggcgggaa
ggtccgttcgtcgccatcaactgtgccgcgatcccggatagtctgcttgaggccacgctg
ttcggttacgaaaagggggcctttaccggggcgcagcaggcacaggccgggaagttcgag
caggcgcaagacggtaccttgctcctcgacgaagttaccgaaatgcccatggggctgcag
gccaagctcctgcgcgtcctgcaggaacgcgaggtcgagcgggttggtggcaagaagccg
gtggccctcaatatccgcatcgtcgccacctctaaccgcgatatggcggaggctgtggcg
aaaggggtcttccgcgaggatctttactaccggctcaatgtttttccggtggccatcccg
ccgttacgtgagcggccgcttgatatcgtgccgatcgcccgctattttctggtcgagcat
ggtggtcgcttcggacgcagcggcgtcggtttcggccccgcagcggaacaggcgctgctg
cgtcatggttggcccggcaacgtgcgcgagcttgaaaatgtgattcaacgggcactgatt
ttgtccaccggggcggagatcggcgtagacaacctgagactggctcccgcgccaacatca
ccgcaggccggtgaggtgtcgcggccagccagcgaagcgccactgcttgaatccgacaaa
aggcttgataatatgaaggatatagagcgcgaacatatccttcggaccttggccgaagtg
ggtggctcgcggaaaatggcaatcgagaggctgggtatttcagagcgcaccttgcgctac
aagctgcagcagtatcgggatgaaggttttttcaaggattga
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