Dechloromonas sp. HYN0024: HYN24_06200
Help
Entry
HYN24_06200 CDS
T05616
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
dey
Dechloromonas sp. HYN0024
Brite
KEGG Orthology (KO) [BR:
dey00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dey03009
]
HYN24_06200 (rimO)
Enzymes [BR:
dey01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
HYN24_06200 (rimO)
Ribosome biogenesis [BR:
dey03009
]
Prokaryotic type
ribosomal protein modification factors
HYN24_06200 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
YajR_YAM
TRAM
Motif
Other DBs
NCBI-ProteinID:
AXS79643
UniProt:
A0A3B7A483
LinkDB
All DBs
Position
1305286..1306608
Genome browser
AA seq
440 aa
AA seq
DB search
MTISQKVPTVGFVSLGCPKASSDAERILTKLRAEGYEISPSYDNSDLVIVNTCGFIDAAV
EESLDAIGEALNENGKVIVTGCLGAKGDIVQSTHPSVLAVTGPHAADEVMGYVHAHLPKP
HDPYSDLVPPQGIRLTPDHFAYLKISEGCNHSCTFCIIPSLRGPLVSRPVGDVLAEAENL
ARAGVKEILVISQDTSAYGVDLKYRTAFWGGKPVKSRLKELCEALASFGIWVRLHYVYPY
PSVDDVIPLMAEGKILPYLDVPFQHASPSILKAMKRPASAENTLERIAKWREICPEIVIR
STFITGFPGETDADFDQLIQFLEDAKLDRVGAFAYSPVEGAKANELEGLPPESVREDRRR
WLMQVQEDISAAKLEAKIDTVIQVLVDAVDEEGTIARSKADAPEIDGVVYLDGHFDAQPG
DFLQVKVIDADHHDLYAQVI
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgactatttcgcaaaaagtgccgaccgtcggcttcgtctccctgggctgcccgaaagcc
agttccgatgccgagcgcatcctgaccaagctgcgggccgaaggctacgagatttctccg
agctacgacaattccgatctggtgatcgtcaatacctgtggcttcatcgatgccgccgtt
gaagagtcgctcgacgccatcggcgaggccctcaacgaaaacggcaaggtcattgtcacc
ggctgcctcggggccaagggcgacatcgtccagtccacgcatccgtccgtgctggccgtg
accggtccgcatgcggccgatgaagtcatgggctatgttcatgcccacctgcccaagccg
cacgatccgtacagtgacctggtgccgccgcagggcatccgtctgacgccggaccatttc
gcctacctgaagatttccgaaggctgcaaccatagctgcaccttctgcatcattccctcg
ctgcgtggcccgcttgtttcacgcccggtgggtgatgtgctggccgaagccgagaatctg
gcgcgagccggcgtcaaggaaattctcgtcatctcgcaggacaccagcgcctatggcgtc
gatctcaagtaccgcactgccttctggggcggcaagccggtcaagtcgcgtctcaaggag
ttgtgcgaggcgctggccagtttcggcatctgggttcgtctgcactacgtttatccttat
ccgtcggtggatgacgttattccgctgatggccgagggcaagatcctgccttacctcgac
gttcccttccagcatgccagtccgagcatcctcaaggcgatgaagcgcccggcttcggct
gagaacaccctggaacggatcgccaaatggcgtgaaatctgcccggaaatcgttatccgc
tcgaccttcatcaccggcttccccggcgaaaccgatgcggatttcgatcagctcatccag
ttcctcgaagatgccaagctcgaccgtgttggtgcctttgcctattcgccggtcgaaggc
gccaaggccaatgaacttgaaggcttgcccccggagtctgtacgcgaggatcgccggcgc
tggctgatgcaggtccaggaggatatttccgccgccaagctcgaggccaagatcgatacc
gtcattcaggtgctggtcgatgcggtggacgaggaggggacgattgcccgttcgaaggcc
gacgcaccggaaatcgacggggtggtctatctcgacggccatttcgatgcccagcccggt
gacttcctccaggtcaaggttatcgatgccgaccaccatgacctctacgcccaggtcatc
tga
DBGET
integrated database retrieval system
