Dechloromonas sp. HYN0024: HYN24_07055
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Entry
HYN24_07055 CDS
T05616
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
dey
Dechloromonas sp. HYN0024
Pathway
dey03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dey00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HYN24_07055 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dey03400
]
HYN24_07055 (uvrB)
DNA repair and recombination proteins [BR:
dey03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HYN24_07055 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HYN24_07055 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
DEAD
UVR
AAA_30
Kinesin
AAA_22
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
AXS79796
LinkDB
All DBs
Position
1493643..1495712
Genome browser
AA seq
689 aa
AA seq
DB search
MSETKHIIPVVCFEGSPFRLHQPFPPAGDQPEAIRQLVEGLGDGLSFQTLLGVTGSGKTY
TMANVIARTGRPALVLAPNKTLAAQLYSEFKEFFPENAVEYFVSYYDYYQPEAYVPSRDL
FIEKDSSINEHIEQMRLSATKSLIERRDVVIVATVSCIYGIGDRDEYHNMILTMRVGDRL
DQRAIVKRLTDMQYERNDVDFHRGTFRVRGDVIDIFPAEHAEHAIRVSLFDDELEALQFF
DPLTGHLLHKALRFTVFPASHYVTPRATVLRAIEAIKDELRERIDFFTRNNKLVEAQRIE
QRTKFDLEMLDQIGFCKGIENYSRHFSGRQAGESPPTLIDYLPADALMFIDESHVSIGQV
GGMYKGDRSRKENLVDYGFRLPSALDNRPLQFNEFEAHMRQTVFVSATPADYENQHAGQV
VEQVARPTGLIDPEVIVRPASTQVDDLLEEIGKRVVVGERVLVTTLTKRMSEDLTDFLAD
NGIKVRYLHSDIDTVERVEIIRDLRLGEFDVLVGINLLREGLDIPEVSLVAILDADKEGF
LRSERSLIQTIGRAARHIHGTAILYADTITRSMQQAIAETGRRREKQIAFNREHGITPRG
VSKKIKDIIDGVYNAESAQTEQKAAQQLAIYEAMDEKTVAREIKRLEKSMLECARNLEFE
KAAAARDELFRLRERVFGVARHDPDGETK
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaaccaagcacatcattccggttgtctgcttcgagggtagcccctttcgattg
caccagccctttccaccggccggcgatcagcccgaggcgattcgtcaactggtcgagggg
ctgggcgacggcctgtcctttcagaccctgctcggggtcaccggctcgggcaagacctac
acgatggccaatgtcatcgcccgcaccggccgcccggctctggttctggcacccaacaag
acgctggcggcgcagttgtattccgagttcaaggagttcttcccggaaaacgctgttgaa
tactttgtctcttattacgactactaccagccggaagcctacgtaccatcacgcgacctg
ttcattgaaaaggacagttcgatcaatgaacacattgagcagatgcggctgtcggcgacg
aaaagcctgatcgaacggcgcgacgtggtgatcgttgccaccgtgtcgtgcatctacggt
atcggcgaccgcgacgaataccacaacatgatcctcaccatgcgcgtcggtgaccggctc
gaccagcgtgccatcgtcaagcgcctgaccgacatgcagtacgagcgcaacgacgtcgat
tttcaccgtggcaccttccgcgtgcgcggcgacgtgatcgacattttcccggccgaacac
gcggaacacgccattcgcgtctcgctcttcgacgacgaactcgaagccttgcagtttttc
gacccgctgaccggccacctgctgcacaaggcgctacggttcaccgtcttccccgcctcg
cactacgtcacgccccgcgccaccgtgctccgcgccatcgaggcgatcaaggatgaattg
cgcgagcgcatcgacttcttcacgcgcaacaacaagctggtcgaggcccagcgtatcgaa
cagcgcaccaagttcgacctcgaaatgctcgaccagatcggtttctgcaagggtatcgag
aattattcgcggcatttttccgggcgccaggcgggtgaatcaccgccgacgctgatcgac
tacctgccggctgatgccctgatgttcatcgacgaatcgcacgtcagcatcgggcaggtc
ggcggcatgtacaagggtgaccgttcgcgcaaggaaaacctcgtcgattacggcttccgc
ctgccttcggctctcgataaccggcccttgcagttcaacgaattcgaggcgcacatgcgg
cagactgttttcgtatcggcgactccggccgattacgagaaccagcatgccggccaggtg
gtcgagcaggtggcgcggccgaccggcttgattgatcctgaggttatcgtgcgcccagcc
tcgacccaggtcgatgatctgctcgaagaaatcggcaagcgtgtggtggtcggcgaacgg
gttctggtgacgaccctgaccaagcggatgtcagaagacctgacggattttctcgccgac
aacgggatcaaggtccgttacctgcactcggacatcgatacggtcgagcgggtcgaaatc
atccgcgacctccgtctcggcgagttcgatgtgctggtcggcatcaatctcctgcgcgaa
ggcctcgatataccggaagtctcgctggtcgccattctcgatgccgacaaggaaggcttt
ttgcgttccgaacgatcattaattcagacaattggccgggccgcacgtcatattcatggc
acagcgatcctttacgctgatacgattacacgatccatgcagcaggcgattgccgaaaca
gggcggcgccgggaaaagcagattgccttcaatcgtgagcacggcattacaccgcgcggg
gtgtccaagaaaatcaaggacatcattgacggggtatataacgcagaatcggcgcagacc
gaacagaaggccgcccagcagttggcaatctacgaggccatggatgaaaagacagtggcc
agggaaatcaagcgtctcgaaaaatcgatgctggagtgcgcaagaaacctggaattcgaa
aaagcggcggcagcccgcgacgaactgttccggctgagggagcgggtgttcggcgtggcg
cgacacgaccctgatggagagacaaaatga
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