Dechloromonas sp. HYN0024: HYN24_10195
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Entry
HYN24_10195 CDS
T05616
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
dey
Dechloromonas sp. HYN0024
Pathway
dey00521
Streptomycin biosynthesis
dey00523
Polyketide sugar unit biosynthesis
dey00541
Biosynthesis of various nucleotide sugars
dey01100
Metabolic pathways
dey01110
Biosynthesis of secondary metabolites
dey01250
Biosynthesis of nucleotide sugars
Module
dey_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
dey00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
HYN24_10195 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
HYN24_10195 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
HYN24_10195 (rfbC)
Enzymes [BR:
dey01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
HYN24_10195 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
AXS80358
UniProt:
A0A3B7A880
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Position
complement(2129738..2130286)
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AA seq
182 aa
AA seq
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MMKVTPTRISDVLIIEPKVFGDERGFFFESFNQKAFNEAVGQEITFVQDNHSKSAKNVLR
GLHYQLPPKAQGKLVRVIQGEVFDVAVDIRKNSATYGQWVGEVLSGENKKQLWIPAGFAH
GFLTLSETAEFLYKTTDYYSQAHERCILWSDHTLDVAWPQCIAPILATKDAQGTSFAMTE
PH
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
ctgatgaaagtgacgccgacccgtatttccgatgttctgatcatcgaacccaaagtattc
ggtgatgagcgcgggtttttcttcgaaagcttcaaccagaaggcatttaacgaagccgtc
gggcaggagatcaccttcgtccaggacaaccactccaagagtgcgaagaacgtcctgcgt
ggtctgcattatcaactgccacccaaggcgcagggcaagctggtccgtgttattcaaggc
gaagtcttcgatgtggcggtcgacatccggaaaaattccgcaacttatgggcagtgggtg
ggggaagtccttagtggcgagaataagaaacagctatggattccggccgggtttgcacat
ggcttcctgacgctctcggaaactgctgaatttctctacaagacgactgactactattcg
caggcgcatgaacgttgcattctctggagtgaccatactcttgatgttgcgtggccacag
tgtattgcccccattcttgcgacaaaagatgcgcaaggaacatcttttgccatgacagag
ccacattaa
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