Dechloromonas sp. HYN0024: HYN24_12865
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Entry
HYN24_12865 CDS
T05616
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
dey
Dechloromonas sp. HYN0024
Pathway
dey00470
D-Amino acid metabolism
dey00550
Peptidoglycan biosynthesis
dey01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dey00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HYN24_12865 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HYN24_12865 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dey01011
]
HYN24_12865 (murD)
Enzymes [BR:
dey01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
HYN24_12865 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
dey01011
]
Precursor biosynthesis
Amino acid ligase
HYN24_12865 (murD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
NAD_binding_7
2-Hacid_dh_C
Pyr_redox_2
NAD_binding_2
Nitro_FeMo-Co
Pyr_redox_3
Hydrolase_6
AdoHcyase_NAD
Shikimate_DH
Motif
Other DBs
NCBI-ProteinID:
AXS80835
LinkDB
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Position
complement(2678125..2679477)
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AA seq
450 aa
AA seq
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MELRGKRVLVVGLGESGLAMAKWLHRQGALVRVADSRETPPNVAALAQVAPGAELVAGPF
VDEPFASAELVALSPGVAKATPAIAAYADKLVSEIELFAAGVREQVPASKIIAITGSNGK
TTTTALTAHLLNGAGVSAVACGNISPSALDALMDAQDADQLPQVWVVELSSFQLETTHHL
NAAAATVLNISEDHLDRYEGSLANYAAAKSRVFKGKGAMILNRDDDWSMANGRCGRQMIT
FGLNAAPRGVDYGLANGCVCRGKEPIVGLDQIKLSGLHNAANVMAALALCEAIGVEASRL
VVPLKSFSGLPHRVETVADIDGVLYVDDSKGTNVGATLAAIEGMGRPVAIVLGGDGKGQD
FSPLKPALEKHGRAVALIGRDAAAIGMALEGSSVPTRILGDMEAAVRWLAAQAQAGDCVL
LSPACASLDMYRNYAHRAEAFIDAVQGLSS
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggaacttcggggcaaacgcgttctggtagtcggactcggtgagtccggactggcgatg
gccaagtggctgcatcgccagggcgcgctggtccgcgttgccgattcgcgcgaaaccccg
cccaatgttgccgccctggcgcaggttgcgcccggtgctgaactggttgccggacccttc
gtcgatgaaccctttgccagcgccgaactggtcgccctgtcgcccggcgtggccaaggca
acgccggcgatcgccgcctatgccgacaagctggtttcggaaattgaactgttcgcagcc
ggcgtgcgggaacaggtgccggcctcgaagatcatcgccattaccggcagcaacggcaag
accacgacgacggccctgactgcccatctgctcaacggtgccggtgtgtcggcggttgct
tgcggcaacatctcgccgtccgccctcgatgccctgatggatgcgcaggatgccgatcaa
ttgccgcaggtctgggtggtcgagctgtccagcttccagctcgagacgacacatcacctg
aatgccgccgcagccaccgtcctcaatatctcggaagaccatctcgatcgctacgagggc
agtttggccaactacgctgccgccaagtcgcgggttttcaagggcaagggggcaatgatc
cttaatcgcgacgacgactggtcgatggctaatggccgttgtggtcgtcagatgatcacc
ttcggcctcaatgccgcaccgcgtggcgtcgattacggtctggccaacggttgtgtctgc
cgcggcaaggagcccattgtcgggctggaccagatcaagctgtcgggcctgcacaatgcc
gccaacgtgatggccgcccttgccctgtgcgaagctattggcgtcgaggcatcccgtttg
gtggtgccgctcaagtctttttccggcctgccgcatcgcgtcgaaaccgtggccgacatt
gatggcgtgctctacgtcgatgactccaagggtaccaatgtcggtgcgacgctggcggcg
atcgaaggcatgggtcgtccggtcgccatcgtgcttggtggcgacggcaaggggcaggat
ttttcaccactcaagccggcactcgaaaagcacggccgggccgtggcgctgatcggccgt
gatgccgccgccatcggcatggccctcgaaggcagtagtgtgccgacgcgcatccttggc
gacatggaagcagctgtccgctggcttgccgctcaagcacaagcgggtgattgtgtcctg
ctctctccggcctgcgccagtctcgacatgtaccgcaactacgcgcaccgggccgaggct
ttcatcgacgcggtgcaggggctgtcatcatga
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