Dechloromonas sp. HYN0024: HYN24_14635
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Entry
HYN24_14635 CDS
T05616
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
dey
Dechloromonas sp. HYN0024
Brite
KEGG Orthology (KO) [BR:
dey00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dey03016
]
HYN24_14635
Enzymes [BR:
dey01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
HYN24_14635
Transfer RNA biogenesis [BR:
dey03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
HYN24_14635
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
AXS81159
UniProt:
A0A3B7A914
LinkDB
All DBs
Position
complement(3043885..3045786)
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AA seq
633 aa
AA seq
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MNVLFEEDGGFKAGSIMADNDSSLQVEMPSGKRSKIKAATVLLRFEKPSASALLEQATPL
AEEIEPDFLWECVNDGEFSFLDFARDYYGHEPAPVEAAAVLLAVHAAPVYFHRKGKGRFR
KAPPDILAAALASLEKKRQQALAMEGWIGELKEFRLPPEIGALTDALLYAPDRNKPETKA
FETACAETGLTAAQLLFKCGAIKSPYFLHYRRFLHEQFPKGTGFPALDAPTLPRDLPRAD
VRAFSIDDANTTEIDDALSVVRLPGIGSRIGIHIAAPGLAIEHGSPLDGIARARLSTVYM
PGNKITMLPDAVVQNYTLAGGTDCPAVSLYLTVNDSLEILSHESRLEMVHIAANLRHHEI
EPWFNAETINGPLPDQPFKDELVHLWHFANACEGRRGKPSAMQGINDYNFEIAGDLADPD
SCTVGISERKRGSPLDKLVAELMIVANSTWGGLLAENNIACLYRAQTQGKVRMTTSPLPH
EGLGVPQYAWMTSPLRRYCDMVNQWQLIACLKGETPAFAQKSAELFGAMRDFELTYAAYA
DFQRQMERYWCLRWIQQRGLSEIDATVRREQSVKLDHLPLLLRVPSLPADLVAGQRVSLT
VESLDLLAPEVSCRFLCLLGENIPVVVVEEDEQ
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtattgtttgaagaagatggcggcttcaaggccggcagcatcatggctgacaac
gatagctcgttgcaggtcgaaatgccgagcggcaagcgcagcaagatcaaggccgcaacg
gtgttgctgcgctttgaaaaaccttccgcctcggcgctgcttgagcaggcgacgccgctg
gccgaagaaatcgaaccggatttcctgtgggagtgcgtgaacgatggcgaattttcgttt
ctggattttgcccgtgattactacggacacgagccggccccggttgaagcggcggcggtg
ctgcttgccgtgcacgccgcgcccgtctatttccaccgcaaaggcaagggccgcttccgc
aaggcgcctcccgacattctcgcagctgctctggccagtcttgaaaaaaagcgtcagcaa
gcgctcgcgatggaaggctggattggcgagctgaaggaatttcgtctgccgccggaaatc
ggcgcgctgaccgacgccctgctctacgcgccggaccgcaacaaaccggaaaccaaggct
ttcgaaacggcctgcgccgaaaccggcctgacggcagcgcagttgctgttcaagtgtggc
gccatcaagtcgccctacttcctgcattaccgccgtttcctgcacgagcagtttcccaag
ggcacgggcttccctgccctggatgctccgaccctgccgcgtgacctgccgcgcgccgat
gtccgtgccttctcgattgacgatgccaacaccactgagattgatgatgctctgtcggtc
gtcaggctgcccggcatcggttcgcgcatcggcatccacatcgccgcaccgggactggcc
atcgaacatggttcgccgctcgacggcattgcccgcgcccgcttgtccaccgtctacatg
cccggcaacaagatcaccatgttgccggatgccgtggtccagaactacacgctggccggt
ggtacggactgcccggcggtgtcactctacctgacggtcaatgactcgctggagattctc
agccatgagtcgcggctggagatggtgcatatcgccgccaacctgcgccaccatgaaatc
gagccatggttcaacgccgaaacaatcaatggtcccttgcctgaccagccgttcaaggac
gaactggtccacctctggcatttcgccaatgcctgcgaaggccgacgcggcaagccatca
gccatgcagggcatcaacgactacaacttcgagatcgccggtgatctggccgatccggac
agttgcaccgtcggtatttccgagcgcaagcggggtagcccgctcgacaagctggtggcc
gaactgatgatcgtcgccaactcgacctggggtggcctgctcgccgaaaacaacatcgcc
tgtctgtaccgggcgcagacgcagggcaaggtccgcatgacgacctcgccactgccgcat
gaaggcctcggtgtgccgcagtacgcgtggatgacctcgccgttgcgtcgctactgcgac
atggtcaatcagtggcagctgatcgcctgtctgaagggtgaaacgccggcttttgcgcag
aagtcggcggaactgttcggtgccatgcgcgactttgagctgacttatgccgcttacgcc
gatttccagcgccagatggagcgttactggtgcctgcgctggatacagcaacgagggctg
agtgaaatcgacgcgaccgtgcgccgtgagcagagtgtcaaactcgatcacctgcccttg
ctcttgcgtgtgccatcgctgccggccgatctggttgccgggcagcgcgtcagcctgacg
gtcgaaagcctcgacctgctggcgccggaagtgagctgtcgattcctctgcctgctggga
gaaaatatcccggttgtggtggtggaggaggatgagcagtga
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