Deinococcus irradiatisoli: DKM44_02090
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Entry
DKM44_02090 CDS
T05530
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
dez
Deinococcus irradiatisoli
Pathway
dez03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dez00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DKM44_02090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dez03400
]
DKM44_02090
Enzymes [BR:
dez01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
DKM44_02090
DNA repair and recombination proteins [BR:
dez03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DKM44_02090
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
UvrD_C_2
OB_YrrC
Viral_helicase1
SH3_13
AAA_11
HHH_5
AAA_16
nSTAND3
TraI_hel_assoc_N
AAA_28
PhoH
AAA_22
AAA
AAA_25
NAT10_TcmA_helicase
TPP_enzyme_M
NTPase_1
nSTAND_NTPase5
NPHP3_N
IstB_IS21
AAA_18
KTI12
Motif
Other DBs
NCBI-ProteinID:
AWN22171
UniProt:
A0A2Z3JFB1
LinkDB
All DBs
Position
404383..406470
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AA seq
695 aa
AA seq
DB search
MTDFTPQHLRVSGSVNKVRYRAESGFTVLSATLKNEEGEDGDATVVGLMPPLDIGDSFTA
EVSMEEHREYGYQYKVLNMVLEAAPADLTEEGVAAYLEARVGGVGKVLAKRIASHFGPAT
FEVLSETPEKLLQVPGITQATLFKMTQSWSAQGGERRALAALQGLGLSISQAQRAAKHFG
EAAAERLQADIYALTEIEGIGFLTADKLAQEQGMALDDPRRLTAAAVYAMQQAAQQGGHS
FLPRERAEKGASHYARVSPGQAALALDNAVELGRLKDDGGRIYLPPVLRAERRLAGTIRT
LIATPPTGEWTVLPGAGEGLSKEQAEVLHLLEEHRLVVLTGGPGTGKSTATRAVADLAER
LGLEVGLCAPTGKAARRLSEVTGRSASTIHRLLGYGPEGFRHNHLEPAPYDLIIVDEVSM
CGDALMLSLLSAVAPGARVLLVGDTDQLPPVDAGLPLHALTQVAPTIRLSQVYRQAARNP
IIRAAHGLLHGRAPEWGPAELHFVPTEADVGARRVALLVRELGGPTRVQVLTPMRKGPLG
VEMLNHHLQGVFNPGVGGVRIADGEARAGDIVVQTKNDYQNEVFNGTLGTVVREERGKLQ
VEFDGNVVELAGAELFNLQLGYALTVHRAQGSEWSTVLGVLHEAHMPMLSRNLVYTALTR
ARERFVGVGSESAWVRAAGRQKDERHTALLERIRG
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacttcacgcctcaacacctccgggtgtccggcagcgtcaacaaagtgcgctac
cgggccgagagcggctttacggtgttgtcggccaccctcaagaacgaggagggtgaggac
ggcgacgccacggtggtgggcctgatgccgccgctggacatcggagacagcttcaccgcc
gaagtcagcatggaagagcaccgcgagtacggctaccagtacaaggtgctgaacatggtg
ctggaagccgcgcccgccgacctcaccgaggagggcgtggccgcttacctggaagcgcgg
gtgggcggggtgggcaaggtgctggccaagcgcatcgcctcgcatttcggcccggccacc
ttcgaggtgctctcggaaacgcccgagaagctgttgcaggtgccgggcatcacccaggcg
accttattcaagatgacccagagctggagtgctcagggcggggagcgccgggcgctggcg
gccttgcagggcctgggcctgagcatttcccaggcgcagcgggccgccaagcacttcggc
gaggcggcggccgagcgcctgcaggccgacatctatgccctgaccgaaatcgagggcatc
ggctttctgaccgccgacaagctggcccaggaacagggcatggccctggacgatccgcgc
cgcctgaccgccgccgccgtgtacgccatgcagcaggccgcgcagcagggcggccacagt
tttctgccgcgcgagcgcgccgagaagggagcttcgcactacgcccgcgtgtcgccgggg
caggcggcgctggccctcgacaacgccgtggaactcgggcggctcaaagacgacggcggg
cgcatctacctgccgccggtgctgcgtgccgagcgccgcctggccggcaccatccgtacc
ctgatcgccacgccgccgaccggcgagtggacggtgttgcccggcgcgggtgaggggctt
tccaaggagcaggccgaggtgctgcacctcctcgaagagcaccgtctggtggtgctgacc
ggcgggcccggcaccggcaagagcaccgccacccgcgccgtggccgacctcgccgagcgc
ctggggttggaggtggggttgtgcgcgcccaccggcaaggccgcccggcggctttcggaa
gtcaccggccgcagcgccagcaccattcaccgcctgctcggctacggcccggaaggcttt
cgccacaaccacctcgaaccggcgccgtacgacctgatcatcgtggacgaggtcagcatg
tgcggcgacgcattgatgctgagcctgctctcggcggtcgcgccgggcgcccgggtgctg
ctggtaggcgacaccgatcagctgccgccggtggacgccggcctgccgctgcacgccctg
acccaggtcgcccccaccatccggctctcgcaggtgtaccggcaggcggcccgcaacccg
attatccgggcggcgcacggcctgttgcacgggcgagcccccgagtggggaccggccgag
cttcactttgtgcccaccgaggccgatgtgggcgcgcggcgggtggccctgctggtgcgc
gaactcggcggcccgacgcgggtgcaggtgctgacccccatgcgcaagggaccgctgggc
gtcgagatgctcaaccaccacctgcagggtgtgttcaatcccggtgtgggcggggtgcgg
atcgccgacggggaagcccgggccggcgacatcgtggtgcagacgaaaaacgattaccag
aacgaggtcttcaacggcacgctcgggacggtggtgcgcgaggagcgcggcaagttgcag
gtggaattcgacggcaacgtggtggaacttgccggcgccgagctgttcaaccttcagctc
ggctacgccctgacggtgcatcgggcgcagggcagcgagtggagcacggtgttgggggtg
ctgcacgaagcccacatgccgatgctctcgcgcaacctagtgtacacagcgttgacgcgg
gccagggagcgctttgtgggggtgggctcggaaagcgcctgggtgcgggcggcggggcgg
cagaaagacgaacgccacacggctttgttggaacgcatccgggggtag
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