KEGG   Deinococcus irradiatisoli: DKM44_04020
Entry
DKM44_04020       CDS       T05530                                 
Symbol
rny
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
dez  Deinococcus irradiatisoli
Pathway
dez03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:dez00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    DKM44_04020 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dez03019]
    DKM44_04020 (rny)
Messenger RNA biogenesis [BR:dez03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     DKM44_04020 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KH_PNO1_2nd KH_NusA_2nd KH_KhpA-B KH_2 Propep_M14
Other DBs
NCBI-ProteinID: AWN22506
UniProt: A0A2Z3JEU9
LinkDB
Position
792385..794064
AA seq 559 aa
MTIFFVILALLVGLMGGYVVGFPRGRQQRQVLEDGAAREAQAEAERIRSAAVAEVGRLRQ
EAEAEAARSRQDAERQRTEASKLVQDASERAAQMILQATAQRDQIAQDAQRDRESLKSER
AETRREREDLGREIERLNRRAEQLDARGDRLDQIEERLEHHQERLDAEERVLQDRARQAE
LKLYEVAGLSAEQAREQILTRLDAELEEEKAIRVKAMTERASAEARRTARHVIAQAIQRS
ASETSAAMSVSVVPIPSDAMKGRIIGREGRNIRAFESLTGVDLIIDDTPEAVILSSFNPV
RREVAKHVLEALVQDGRIHPTRIEEMVHKAQDEMKAFIHAQGEEAAIEAGVVGLKPGIMQ
LLGRMYFRTSYGQNVLKHSVQVAHLTGIMAAELGLDASLARRAGLMHDVGKSIDREIEGT
HVDIGINLARRFSEPLEVIDAIAHHHDPENGETLYSVLVAAADAISAARPGARREELESY
IKRLEALEQIAVSFPGVNSAYAIQAGREVRVIVEPDKVSDAQATLLAREIAGRVEQDMEY
PGQVQVTVVRELRATEYAK
NT seq 1680 nt   +upstreamnt  +downstreamnt
atgaccatcttttttgtcatcctggcgctcctggtcggtttgatgggcggctacgtggtc
gggtttccgcgtggacgccagcagcggcaggtgctggaagacggcgcggcgcgtgaagcg
caggccgaagcggagcggattcgctcggccgcagtggccgaagtcggccgcctgcgccag
gaagccgaagccgaagctgcccgcagccgtcaggacgccgagcgccagcgcaccgaggcc
agcaaactggttcaggacgcctccgaacgcgccgcccagatgatcttgcaggccaccgcc
cagcgagaccagatcgcccaggacgcccagcgcgaccgcgagagcctcaagtccgagcgc
gccgagacccgccgcgagcgcgaggatttggggcgcgagatcgagcgcctcaaccgccgc
gccgagcagctcgacgcccgtggcgaccgcctcgaccagatcgaggagcgcctcgaacac
caccaggagcgcctggacgccgaggagcgcgtcttgcaggaccgggcgcggcaggccgaa
ctcaagctctacgaggtggccggcctcagcgccgagcaggcccgcgagcagattcttacg
cgcctcgacgccgaactcgaggaggaaaaggccatccgcgtcaaggccatgaccgagcgg
gccagcgccgaggcgcggcgcaccgcccgccacgtcatcgcccaggcgattcagcgcagc
gcctccgagacttcggccgccatgagcgtcagtgtggtgccgattccgagcgacgcgatg
aaaggccgcatcatcgggcgcgaggggcgcaacatccgcgccttcgagagcctcaccggg
gtggacctgatcatcgacgacacgccggaagcggtgattctcagctcgttcaacccggtg
cgccgtgaggtcgccaagcacgtcctcgaagcgctggtgcaggacgggcgcattcacccc
acccgcatcgaggaaatggtccacaaggcccaggacgagatgaaggccttcattcacgcc
cagggcgaggaagcggccatcgaagcgggcgtggtgggcctcaagcccggcatcatgcag
cttctcgggcggatgtacttccgcaccagttacggccagaacgtcctcaagcactcggtg
caggtggcgcacctgaccggcatcatggccgccgaactcggcctcgacgcttccctggcc
cgccgcgccgggctgatgcacgacgtgggcaagagcatcgaccgcgagatcgagggcacc
cacgtcgacatcggcatcaatctggcccggcgcttttccgagccgctggaagtcatcgac
gccatcgcccaccaccacgacccggaaaacggcgaaacgctatactcggtgctggtggcc
gccgccgacgcgatcagcgcggcccgtcccggcgcgcggcgcgaggaactcgaaagttac
atcaagcgcctagaagcgctcgagcagatcgcggtgtcgtttcccggcgtcaactcggcc
tacgccatccaggccgggcgcgaggtgcgggtcatcgtcgagccggacaaggtcagcgac
gcccaggccaccctgctggcccgcgagatcgccgggcgcgtcgagcaggacatggaatac
cccggtcaggtgcaggtcacggtggtgcgcgaactgcgggccaccgagtacgccaagtaa

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