Deinococcus irradiatisoli: DKM44_04020
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Entry
DKM44_04020 CDS
T05530
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
dez
Deinococcus irradiatisoli
Pathway
dez03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dez00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DKM44_04020 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dez03019
]
DKM44_04020 (rny)
Messenger RNA biogenesis [BR:
dez03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DKM44_04020 (rny)
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Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_PNO1_2nd
KH_NusA_2nd
KH_KhpA-B
KH_2
Propep_M14
Motif
Other DBs
NCBI-ProteinID:
AWN22506
UniProt:
A0A2Z3JEU9
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All DBs
Position
792385..794064
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AA seq
559 aa
AA seq
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MTIFFVILALLVGLMGGYVVGFPRGRQQRQVLEDGAAREAQAEAERIRSAAVAEVGRLRQ
EAEAEAARSRQDAERQRTEASKLVQDASERAAQMILQATAQRDQIAQDAQRDRESLKSER
AETRREREDLGREIERLNRRAEQLDARGDRLDQIEERLEHHQERLDAEERVLQDRARQAE
LKLYEVAGLSAEQAREQILTRLDAELEEEKAIRVKAMTERASAEARRTARHVIAQAIQRS
ASETSAAMSVSVVPIPSDAMKGRIIGREGRNIRAFESLTGVDLIIDDTPEAVILSSFNPV
RREVAKHVLEALVQDGRIHPTRIEEMVHKAQDEMKAFIHAQGEEAAIEAGVVGLKPGIMQ
LLGRMYFRTSYGQNVLKHSVQVAHLTGIMAAELGLDASLARRAGLMHDVGKSIDREIEGT
HVDIGINLARRFSEPLEVIDAIAHHHDPENGETLYSVLVAAADAISAARPGARREELESY
IKRLEALEQIAVSFPGVNSAYAIQAGREVRVIVEPDKVSDAQATLLAREIAGRVEQDMEY
PGQVQVTVVRELRATEYAK
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcttttttgtcatcctggcgctcctggtcggtttgatgggcggctacgtggtc
gggtttccgcgtggacgccagcagcggcaggtgctggaagacggcgcggcgcgtgaagcg
caggccgaagcggagcggattcgctcggccgcagtggccgaagtcggccgcctgcgccag
gaagccgaagccgaagctgcccgcagccgtcaggacgccgagcgccagcgcaccgaggcc
agcaaactggttcaggacgcctccgaacgcgccgcccagatgatcttgcaggccaccgcc
cagcgagaccagatcgcccaggacgcccagcgcgaccgcgagagcctcaagtccgagcgc
gccgagacccgccgcgagcgcgaggatttggggcgcgagatcgagcgcctcaaccgccgc
gccgagcagctcgacgcccgtggcgaccgcctcgaccagatcgaggagcgcctcgaacac
caccaggagcgcctggacgccgaggagcgcgtcttgcaggaccgggcgcggcaggccgaa
ctcaagctctacgaggtggccggcctcagcgccgagcaggcccgcgagcagattcttacg
cgcctcgacgccgaactcgaggaggaaaaggccatccgcgtcaaggccatgaccgagcgg
gccagcgccgaggcgcggcgcaccgcccgccacgtcatcgcccaggcgattcagcgcagc
gcctccgagacttcggccgccatgagcgtcagtgtggtgccgattccgagcgacgcgatg
aaaggccgcatcatcgggcgcgaggggcgcaacatccgcgccttcgagagcctcaccggg
gtggacctgatcatcgacgacacgccggaagcggtgattctcagctcgttcaacccggtg
cgccgtgaggtcgccaagcacgtcctcgaagcgctggtgcaggacgggcgcattcacccc
acccgcatcgaggaaatggtccacaaggcccaggacgagatgaaggccttcattcacgcc
cagggcgaggaagcggccatcgaagcgggcgtggtgggcctcaagcccggcatcatgcag
cttctcgggcggatgtacttccgcaccagttacggccagaacgtcctcaagcactcggtg
caggtggcgcacctgaccggcatcatggccgccgaactcggcctcgacgcttccctggcc
cgccgcgccgggctgatgcacgacgtgggcaagagcatcgaccgcgagatcgagggcacc
cacgtcgacatcggcatcaatctggcccggcgcttttccgagccgctggaagtcatcgac
gccatcgcccaccaccacgacccggaaaacggcgaaacgctatactcggtgctggtggcc
gccgccgacgcgatcagcgcggcccgtcccggcgcgcggcgcgaggaactcgaaagttac
atcaagcgcctagaagcgctcgagcagatcgcggtgtcgtttcccggcgtcaactcggcc
tacgccatccaggccgggcgcgaggtgcgggtcatcgtcgagccggacaaggtcagcgac
gcccaggccaccctgctggcccgcgagatcgccgggcgcgtcgagcaggacatggaatac
cccggtcaggtgcaggtcacggtggtgcgcgaactgcgggccaccgagtacgccaagtaa
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