Deinococcus irradiatisoli: DKM44_06190
Help
Entry
DKM44_06190 CDS
T05530
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
dez
Deinococcus irradiatisoli
Pathway
dez00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
dez00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
DKM44_06190 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
dez01007
]
DKM44_06190 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dez03016
]
DKM44_06190 (lysS)
Enzymes [BR:
dez01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
DKM44_06190 (lysS)
Amino acid related enzymes [BR:
dez01007
]
Aminoacyl-tRNA synthetase
Class II (A)
DKM44_06190 (lysS)
Transfer RNA biogenesis [BR:
dez03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
DKM44_06190 (lysS)
Prokaryotic type
Other AARSs
DKM44_06190 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
AWN22868
UniProt:
A0A2Z3JME5
LinkDB
All DBs
Position
1235377..1236942
Genome browser
AA seq
521 aa
AA seq
DB search
MSDAPPSAHDQPAPLQRELHEQTVSRLNNQAALKEAGFETHPYSYPQTHHAADVLRDHPG
GEHGERWDDVTYSLAGRVMLLRHMGGAAFADLQDESGTVQLYFGKKTTEQFAATKKIDLG
DIIGVRGVAFVTKTGQVTIEVHSWQPLVKSLHPLPSKVHGIQDEELRARRRYVDLMINPE
SRAVYRTRSKIVRAIRHYLDDQGFMEVEGPTLQVVPGGTEARPFKTFHNALSHEFSMRIS
LELYLKRLVVGGFERVYEIGRNYRNEGIDRTHNPEFTMLETYFAYGDYQDMMRLVEQMLH
HLVMEVHGQPVIEYQGRKVDFSLPFRRLDFVTALKDAAQLDFDPLDLAQLRAWSDVRHPE
FRKVPDYKLLDKLGGEYVEPQLINPTFLTDMPLVISPLVKAHRSRPGLAERADLYVAGFE
LAPIYSELNDALDQRARFEAQTARRDAGDDEAHEQDEDFLLALEYGMPPTAGMGMGIDRL
TMLLTDKDSIRDVLLFPLLKPEEGQPSPLNPHTPLPESAPS
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatgccccccccagcgcccacgaccagcctgctccgcttcagcgcgagctgcac
gagcagaccgtttcccgcctcaacaaccaggcggccctgaaagaagcgggcttcgagacg
catccctacagctacccccagacccaccacgccgccgacgtgctgcgcgaccatcccggc
ggcgaacacggcgagcgctgggacgacgtgacctacagcctggccggacgggtgatgctg
ctgcgccacatgggcggcgcggccttcgcggatttgcaagacgagagcggcacggtgcag
ctctacttcggcaagaaaaccaccgagcagttcgccgccaccaagaaaatcgatctgggc
gacatcatcggcgtgcgcggcgtggcgttcgtgaccaagaccgggcaggtcaccatcgag
gtgcacagctggcagccgctggtcaagagtctgcacccgctgcccagcaaggtgcacggc
attcaggacgaggaactgcgcgcccggcggcgctacgtggatttgatgatcaaccccgag
agccgggcggtgtaccgcacccgctcgaagatcgtgcgcgccatccgccactacctcgac
gaccaggggttcatggaagtcgagggaccgaccctgcaggtggtgccgggcggcaccgag
gcccggcccttcaagacctttcacaacgcgctctcgcacgagttctcgatgcgcatcagc
ctggagctctatctcaagcgcctggtggtgggcggcttcgagcgggtctacgagatcggg
cgcaactaccgcaacgagggcatcgaccgcacccacaaccccgaattcaccatgctggaa
acctacttcgcctacggcgactaccaggacatgatgcggctcgtcgagcagatgctccac
cacctggtgatggaggtgcacggccagccggtgatcgagtaccagggccggaaggtggac
ttcagcttgccgttcaggcgcctggatttcgtcacggcgctcaaggacgccgctcagctc
gacttcgacccgctcgatctggcgcagctgcgcgcctggagcgacgtcaggcacccggaa
ttccgcaaggtgccggactacaagctgctcgacaagctcggcggcgagtacgtggagccg
cagctgatcaaccccaccttcctgaccgacatgccgctggtgatcagcccgctggtcaag
gcgcaccgttcgcgccccgggctggccgagcgggccgatctgtacgtggccggcttcgaa
ctcgcgccgatctactcggaactcaacgacgccctcgaccagcgcgcccgcttcgaggcc
cagaccgcccggcgcgacgcgggcgacgacgaagcgcatgaacaggacgaggactttttg
ctggcgctggaatacggcatgccgccgaccgccggtatgggcatgggcatcgaccgcctc
accatgctgctgaccgacaaggacagcatccgcgacgtgctgctctttccgctgctcaaa
cccgaggaaggccagcccagtccgctgaacccccacaccccactgccggaaagcgcgcct
tcctga
DBGET
integrated database retrieval system
