Deinococcus irradiatisoli: DKM44_06220
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Entry
DKM44_06220 CDS
T05530
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
dez
Deinococcus irradiatisoli
Brite
KEGG Orthology (KO) [BR:
dez00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dez03016
]
DKM44_06220
Enzymes [BR:
dez01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
DKM44_06220
Transfer RNA biogenesis [BR:
dez03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DKM44_06220
Prokaryotic type
DKM44_06220
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AWN22872
UniProt:
A0A2Z3JCV8
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All DBs
Position
complement(1241182..1242117)
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AA seq
311 aa
AA seq
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MPIYVVDKPLNLTSHDVVGRARRVLGTRQVGHTGTLDPLATGVLVLCVGASTKLVQFMER
DTKDYLAFISLGAATPTLDAEGPLGEVADVPDFSDEEIGDALQGFLGAQQQVPPQYSALQ
VGGVRAYVAARAGGALDLPARPVVIHELDLLGRAASLAAAPQTFSPTPDGRWRPAATGQK
FSLPPRLGDFPTLVVWARVGSGTYLRSLARDVGAALGVPAHLSGLIRTRAGRFGLTQATP
LDLLGEQAGLGDLQALDLPIIEAGPELALQLRQGKRPAHSGTGRFVVLLSGELVAVVDGD
GEQLKVVRAWA
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgccgatttacgtggtggacaagccgctgaacctcacctcgcacgatgtggtggggcgg
gcgcggcgcgtgctgggcacccggcaggtgggccacaccggcacgctcgatccgctggcg
accggggtgctggtgctgtgcgtgggcgccagcaccaaactggtgcagttcatggagcgc
gataccaaggactatctggccttcatcagcctcggcgccgccacccccaccctcgacgcc
gaggggccgctcggcgaggtggccgacgtccccgacttcagcgacgaggagatcggcgac
gccctgcaaggctttctgggagcgcagcagcaggttccgccgcagtacagcgccttgcag
gtgggcggggtgcgggcctacgtggcggcccgcgccggcggcgccctggatttgccggcc
cgcccggtggtgattcacgagctggacctgctcggccgcgccgccagcttagccgccgcg
ccgcagaccttctcccccaccccggacgggcgctggcggcccgccgcgacgggccagaag
ttcagcctgccgcccaggctgggcgattttcccacactggtggtgtgggcgcgggtgggc
agcggcacctacctgcgttcgctggcccgcgacgtgggggcggcgctgggcgtgccggcc
cacctctcgggcctgatccgcacccgcgccggaaggttcgggctgacgcaggccacgcca
ctggaccttttgggcgagcaggccggactgggtgacctccaggcgctggacctgccgatc
atcgaggccggtccggagctggcgttgcagctgcggcaaggcaagcggcccgcgcacagt
ggcacgggccggtttgtggtgctgctttcgggcgaactggtggcggtggtggacggcgac
ggagagcagctgaaagtggtgcgggcctgggcctaa
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