Deinococcus irradiatisoli: DKM44_09125
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Entry
DKM44_09125 CDS
T05530
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
dez
Deinococcus irradiatisoli
Pathway
dez03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dez00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DKM44_09125 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dez03019
]
DKM44_09125 (recQ)
03400 DNA repair and recombination proteins [BR:
dez03400
]
DKM44_09125 (recQ)
Enzymes [BR:
dez01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DKM44_09125 (recQ)
Messenger RNA biogenesis [BR:
dez03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DKM44_09125 (recQ)
DNA repair and recombination proteins [BR:
dez03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DKM44_09125 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HRDC
RQC
DEAD
RecQ_Zn_bind
Helicase_C
ResIII
wHTH-HSP90_Na-assoc
Motif
Other DBs
NCBI-ProteinID:
AWN23370
UniProt:
A0A2Z3JJ37
LinkDB
All DBs
Position
1834007..1836208
Genome browser
AA seq
733 aa
AA seq
DB search
MTASVPDAQVLHVLKSVWGYEQFRGVQQDIVRAVVGGENALVLMPTGGGKSLCYQVPSLL
RKGVGVVVSPLIALMKDQVDALRENGVRAAYLNSSLSPDAAREVEAALLSGELDLLYAAP
ERLLTPRTLDLLARSEVALFAIDEAHCVSQWGHDFRPEYQGLGVLAERFPDLPRLALTAT
ADERTRADIIRVLSLEDAHLFVSSFDRPNIQYRIQQKGAGKAGPKSELLDFIRAEHPGEA
GIVYCLSRRSVEETAQWLSAQGVAALPYHAGLSPRERNSAQERFLQEEGLIVVATVAFGM
GIDKSNVRFVAHLDLPKSLEGYYQETGRAGRDGLPSTAWMTYGLADVVNVRRMLAQSEAP
EHVKRVEAGKLDSLLAYCETASCRRQVLLGYFGETLPEPCGNCDTCLNPPQTFDATRPAQ
MALSAAIRTGNRFGAAHLTDVLLGNATERVRGLGHHQLPTFGVGKMLPDRAWRNIMRQLV
ALGYLTTDAAGHGSLIASAKAGPLLKGEETLWLREDVLTPPSSKKARRSAGAAALGAQAG
NLFEALRALRLKLAREQAVPPYVIFNDATLREMAERRPTSLAVLGTIGGVGTRKLAQYGE
TFLEVLRGPAGEGAALPGAAANSALLGILNRRPPSDEPPAEIPHGRLFGAAAQPGMADPE
VAERLRELRRILSKETGHSAFVVFPNATLDALAERQPRSLDDLRGMPGLGEKRIEAYGER
IVAAVRGEHPVSR
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgactgcctccgtccccgacgcccaggttctccacgttctcaaatcggtgtggggctac
gagcagttccggggcgtgcagcaagacatcgtgcgggccgtggtgggcggcgagaacgcg
ctggtgctgatgcctaccggcggcggcaagagtttgtgttatcaggtgccgagcctgctg
agaaaaggcgtgggggtggtggtcagcccgctgatcgccctgatgaaagaccaggtggac
gccctgcgcgaaaacggggtgcgggccgcctacctcaacagcagcctcagccccgacgcc
gcccgcgaggtcgaggccgccctgctgtccggcgaactcgatctgctctacgccgcgccg
gaacggctgctgacgccgcgcaccctcgatctgctcgcgagaagcgaggtggccctcttc
gccatcgacgaagcgcactgcgtgtcacagtggggccacgacttccggccagaataccag
ggcctgggcgtgctggccgagcgcttcccggatctgccccggctggccctcaccgccacc
gccgacgagcgcacccgcgccgacatcatccgggtgctgtctctggaagacgcgcacctg
ttcgtcagcagtttcgaccggcccaacatccagtaccgcattcagcagaagggcgccggc
aaggcggggccgaagtccgaactgctggacttcatccgtgccgagcaccccggcgaagcg
ggcatcgtgtactgtctgtcgcgccggagcgtggaggaaaccgcccagtggctcagcgcc
cagggggtggcggccctgccctaccatgccgggctctcgccgcgtgagcgcaacagcgcc
caggagcgtttccttcaggaagaaggcctgatcgtggtcgccaccgtcgccttcggcatg
ggcatcgacaaatcgaacgtgcgcttcgtggcccacctcgatctgcccaagagcctggaa
ggctactaccaggaaaccgggcgggccgggcgcgacggcctgcccagcaccgcctggatg
acctacggcctcgccgacgtggtgaacgtgcgccggatgctggcccagagcgaagcgccc
gaacacgtcaagcgggtggaggcgggcaagctcgattctctgctggcctactgcgaaacc
gcttcgtgccgccgtcaggtgctgctgggctatttcggcgagaccctgccggagccgtgc
ggcaactgcgacacctgcctgaacccgccgcagaccttcgacgctacccgcccggcccag
atggcgctctcggcggcgatccgcaccggcaaccgcttcggggccgcccacctcaccgac
gtgctgctgggcaacgccaccgagcgggtgcgcgggttgggccaccaccagttgccgacc
ttcggcgtcggcaagatgctgcccgacagagcgtggcgcaacatcatgcgccagttggtg
gcgctgggctacctcaccaccgacgccgccgggcacggctcgttgatcgcctcggccaag
gccgggccgctgctcaagggcgaggaaacgctgtggctgcgcgaggacgtgctgacgccg
ccgagcagcaagaaagcccggcgcagcgccggggccgccgcgctcggcgcgcaggccggg
aacctcttcgaagcgctgcgggccctgcggctcaagctggcgcgcgagcaggccgtgccg
ccctacgtgatcttcaacgacgccaccctgcgcgagatggccgagcgccgccccacctcg
cttgcggtgctgggcaccatcgggggggtgggcacgcgcaagctggcccagtacggcgag
acattcctggaggtgctgcgtggcccggccggcgagggtgcggcgctgcccggggcggcc
gccaacagtgcgctgctgggtatcctcaaccgccggccgccttcagatgagccgcccgct
gagataccgcatgggcgcttgttcggcgcggcggcgcaacccggcatggccgacccggag
gtggccgagcggctgcgcgagctgcgccgcatcctgtccaaggaaactgggcacagcgcc
ttcgtggtgtttcccaacgctaccctggacgcgctggccgagcggcagccgcgcagcctg
gacgacctgcgcggcatgccgggcctcggcgagaaacgcatcgaggcgtacggcgagcgc
atcgtggcggcggtgcgcggcgagcaccctgtttcgcggtga
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