Cavenderia fasciculata (cellular slime mold): DFA_00006
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Entry
DFA_00006 CDS
T02668
Symbol
rad54b
Name
(RefSeq) SNF2-related domain-containing protein
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
dfa
Cavenderia fasciculata (cellular slime mold)
Pathway
dfa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dfa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DFA_00006 (rad54b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dfa03400
]
DFA_00006 (rad54b)
DNA repair and recombination proteins [BR:
dfa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
DFA_00006 (rad54b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
DEAD
ZGRF1-like_N
Rad4
Motif
Other DBs
NCBI-GeneID:
14871530
NCBI-ProteinID:
XP_004357723
UniProt:
F4PXB9
LinkDB
All DBs
Position
Unknown
AA seq
830 aa
AA seq
DB search
MKKGFKGFVTPYKTDTASTAAPPPPITKPSKLFKANTTSTTSTAPPSLTKPSKSSKPLPT
KTTTTTQSKDEDQYYKVMWCEASSKKHKTHLDGTLSYDVTKKQAILYDETGKDIGRSNFT
IVPTLSIGYKSKISGKEYEIIESIKQSEFKEIKSSSSSTSTSSSFTKSKEKKRKKDQQEE
EEEENISSLSHNDSFKNVLPNSTLLKTRTKILSPLFNPNATNAFVLHTPTIEEIKNNTAT
HVVVDPHLSSKLRPHQRLGVEFLYQCLTGNKHEYGYGAILADQMGLGKTLQALTLIWTMV
QQNPNSSTKPMVKKVIIVAPATLIGNWRSEIITWLGREKLKPVTLSDKLKVSKADQLKDF
GESQTDPVLIISYEQCVSYSNQLEKLSDIGLLIADEGHRIKNATTKTAMAVNSIKATRRI
ILSGTPIQNDLYEFYAMVDFVNPGALGTPNEFRRDFATPIQKSRDSNSNQREKDQGILKS
IQLAKMTSSFILRRKSNVLEKYLPLKSTQIIFCKMPSTQSKIYQETINSFAEKDFSLSNI
ILLKKLCNSKDSGKLLFVGDLIKSLPRGEKIVLVSNYTQTLDIFETLCKELSFGFLRLDG
QVEADSRQFLITKFNDPADQHKVFLLSAKAGGVGINLIGANHIVLFDPDWNPAVDLQAME
RVWRQGQEKNYFDKGGFTTDELKDIFSFNSNTSCETHDLLQCKCSCPSNSLGGGGGGGGS
KLASYKNDVIKGIDHHQTWFHLNQNYIQQIKNQSINISPILLSDLFTKHINYIFIKRPQS
INQDIDIGESLSFLEETEQIEEEKQEMEEDDEEEEYIEPTKTKRLKKQKI
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaggatttaaaggttttgtaacaccttataaaacagatactgcctctactgct
gctcctcctcctcccattacaaaaccttcaaaactttttaaagcaaataccacttctact
acttctactgctcctccttccctcacaaaaccttcaaaatcatcaaaacctttaccaacc
aaaacaacaacaacaactcaatccaaagatgaagatcaatattataaagtaatgtggtgt
gaagcatcatcaaagaaacataaaactcatctagatggtacattgtcttatgatgtaaca
aagaaacaggcaatactttatgacgagactggaaaagatataggaagatcaaattttacg
attgtaccaaccttgtctattggttataaatctaaaatctctggcaaagaatacgaaatt
atagaatctataaagcaatctgaatttaaagaaatcaaatcatcatcatcatcaacatca
acatcatcatcttttacaaagagtaaagaaaaaaagagaaaaaaagatcaacaagaggaa
gaagaggaagaaaatattagttcactttcacataatgattcatttaaaaatgtattacca
aatagtacattattaaagacacgaaccaagattctcagtcctttatttaatccaaatgca
acaaatgcatttgtattgcatactcctactattgaagagattaaaaacaatactgcaacc
catgttgtggtcgatccacatctctcatcaaaactaagacctcatcagagattgggtgta
gagtttttgtatcaatgcttgacgggaaacaaacatgaatatggttatggtgcaatattg
gctgatcaaatgggacttggtaaaactcttcaggcgttgaccttgatatggacaatggta
caacaaaatcccaatagcagcaccaagccaatggttaaaaaggtgatcattgttgctcct
gccaccctcattggtaattggcgttcagagattatcacatggctgggaagagaaaagcta
aaacctgtgacattgtctgacaagctcaaggtatcaaaggccgatcaattaaaagacttt
ggagaatcacagactgacccagttttaatcatatcgtacgaacaatgtgtatcctattca
aaccaactcgaaaagctttccgatattggtcttttaatagcagacgagggtcatcgtata
aagaatgcaacaacaaagactgccatggcagtaaattcaattaaagcaactcgacgaatc
attctttctggaacaccaattcaaaacgacctctatgaattttatgcaatggtcgacttt
gtcaatcctggtgcccttggaacgccaaacgagtttagacgtgattttgctacaccaatt
caaaagagtagagatagtaattcaaatcaaagggaaaaggatcaaggtatattaaaatca
attcaattggcaaaaatgacaagttcttttatccttagaagaaaatcaaatgtattggaa
aaatatttacctcttaaatctacacaaataatattttgtaaaatgccaagtacacaaagt
aaaatttatcaagaaactataaactcttttgcagaaaaggatttttcattatcgaatatt
atattgttgaaaaaattatgtaattcaaaggattcaggaaaattattatttgttggtgat
ttgattaaatctttacctagaggagaaaagattgttctagtatccaattatacacaaact
ttggatatttttgagacattgtgcaaagaattgtcatttggatttttgcgtttggatggc
caagtggaagccgactctagacaatttttaattacaaaattcaacgatccagcagaccaa
cataaagttttccttctctctgccaaagctggtggtgttggaatcaacttgattggtgca
aatcacattgtccttttcgatcctgattggaatccggcagttgacttgcaggcaatggag
agagtttggagacaggggcaagaaaaaaattattttgacaagggaggattcacaacagac
gaattaaaagatatattttctttcaactcaaatacctcttgcgaaactcatgatctatta
cagtgcaagtgttcatgtccttcaaattcactcggtggtggtggtggtggtggtggttca
aaactcgcttcttacaagaatgatgtcatcaagggcatagaccatcatcaaacttggttc
catttgaatcaaaattatatccaacaaatcaaaaatcaatcaatcaatatttctcccatt
ctcttgtctgacctttttacaaaacatatcaactatatttttattaaaagacctcaatct
attaatcaagatattgatattggtgaatcattatcttttttggaagaaacagaacaaatt
gaagaagaaaaacaagaaatggaagaagatgatgaagaagaagaatatatagaaccaaca
aaaacaaaaagattaaaaaaacaaaaaatttag
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