Cavenderia fasciculata (cellular slime mold): DFA_00033
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Entry
DFA_00033 CDS
T02668
Name
(RefSeq) hypothetical protein
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
dfa
Cavenderia fasciculata (cellular slime mold)
Pathway
dfa03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
dfa00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
DFA_00033
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dfa03019
]
DFA_00033
03009 Ribosome biogenesis [BR:
dfa03009
]
DFA_00033
03036 Chromosome and associated proteins [BR:
dfa03036
]
DFA_00033
Enzymes [BR:
dfa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
DFA_00033
Messenger RNA biogenesis [BR:
dfa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DFA_00033
Ribosome biogenesis [BR:
dfa03009
]
Eukaryotic type
90S particles
RNase
DFA_00033
Prokaryotic type
rRNA processing factors
DFA_00033
Chromosome and associated proteins [BR:
dfa03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
DFA_00033
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
dsrm
RM44_endonuclase
DND1_DSRM
Motif
Other DBs
NCBI-GeneID:
14871805
NCBI-ProteinID:
XP_004357750
UniProt:
F4PXE6
LinkDB
All DBs
Position
Unknown
AA seq
1106 aa
AA seq
DB search
MTDNYKGLLQEICQKHREGVPNYTECHQAPGPNNSNIFTSQVHCLFRGTDLSGEGKGKTK
KDAEKASALSVIHQLFILFPEIKPTSFNSSPSSPSSSSDPSSYSSSYTSSSPSPVANHFV
PSSSSSYSASATSSSSSVPYTHTIFSIPTTSTTSTTTSTTSATIIEENDTISSSPSITPP
PTPPFRSHERPTTPTSSSSTYLYDDQSSTSSFNIDSSKSSSSYTPTTTTTTQQQLQIDAL
QKIVKDQQLKFAKEIFEMKQNHERSNKVLEDRIAEMERKFEVVKEFVDHKLKQPKKNNDK
THSYKIVMATSTVEKPPILSPSSSSSSTYTSTSTSSRTYGRQQQSTINYQSVVHPEIAKI
DNNKVPETMNFLVYHLVVSHGFQPSNFSHLDRKYRHNGFVLYTQEILHRKPVIHISNAAG
QHFGVTVIQSKQVSVSRSDFQFMLTFFNFFYGPVLEQHYMPTNENDRHFFVPDVEPADTA
PGSMSVGEKFRILFDLIQQIDVLGVCPPGIKDKNQMVEFFKERFLNKVQMTARGDFVVCR
GVDPKKTFRYDSVPYKVKRMDGKPVPLVSNEAPIIMCTHTGASLGGEEYWSLKPLLYFNK
DGNEEDLSRWNIDPYLPKSDVAPREHAPVRDAHLEEPIHFEDYIRKRKLQERDPLVHKVY
GITSEMHAMAKVIVLVYQPELKWWAKMYEFQKSFVSIKNDLLLRQVFTHPSTKMINSLVP
QSYNIFRDYLPFDGDNQRLEFLGDSVLKFCTTYYLYFKYPQLREGQLTSKRSEITSNSYL
LSKCERWNVVDLLRFTVTEDMKKPKADVMEAIFGALFIERGVKEAYQFIVQNIFQDPEFS
QFPEYLCSCISELPPSRRQSKFLFDLRINIKKTCLFQQSMTCSGDLDSYERLEFLGDAFL
DLVISKHLYDQFPDKQEGFLSTARAGLVKNEALAQISQKINLSLAISDPHIHFTVKRLGD
LLEAFIGCLLLDCGMEKTKYFIHTQFNLASKDTVLEAYRLECISSKQFQTTTTSTTSTTS
TAIPSSPQQYNGNNNNDNANSIGIDSVIESFDAINIKQQQNGTDFEQEDNSSDSSFESDD
DDEEEHKEIQIINNNNNNDDNNNNNN
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgacagataattacaaaggactcttacaagagatttgtcagaaacatcgagaaggtgtt
cccaactatacagaatgtcatcaagctcctggtccaaataattcaaatatattcacttca
caggtacattgtctgtttagaggtacagatctttcgggtgagggaaagggaaagacaaag
aaagatgctgaaaaggcttctgctcttagtgtcattcatcaactatttatactctttcct
gaaattaaacctacttcttttaattcttctccctcttctccctcttcctcctctgatcct
tcatcttattcatcttcttatacctcttcttcaccttcacctgtggccaatcattttgtc
ccttcttcttcttcctcttactctgcttctgcaacctcctcctcctcttctgtaccatac
acacatactatatttagtataccaactacatcaactacatcaacaacaacaagtaccaca
tcagctactattatagaagagaatgataccatttcatcatcaccatctattacaccacct
ccaacacctccatttagaagtcatgaaagaccaactacacctacatcatcgtcatctacc
tacttgtacgatgatcaatcatcaacgtcatcatttaatatcgactcttccaaatcatca
agttcctacacaccaacaacaacaacaacaactcaacaacaacttcaaattgatgcactt
caaaaaatagtaaaagaccaacaattaaagtttgccaaagagatatttgagatgaaacaa
aaccatgaacgttccaacaaggtactggaagatagaatagcagagatggaaagaaagttt
gaagtcgtaaaagaatttgttgatcacaaactcaaacaacctaaaaagaataatgacaag
actcattcctataagattgtcatggctacatctactgtagagaaaccaccaattctttct
ccttcttcttcttcctcctccacttacacttccacttccacttcttctcgtacatatgga
agacaacaacaatcaacaatcaactatcaaagtgtggtacatcctgaaattgccaaaatt
gacaacaacaaagtaccagagacgatgaatttccttgtctatcatcttgtcgtttctcat
ggtttccaaccatccaacttttcacatctcgatcgtaaatatcgacacaatggatttgta
ctctacactcaagagatacttcatcgaaagcctgtaatacatatatccaatgctgcagga
caacactttggagtaacagtcatccagtcaaagcaggttagtgtcagtcgatccgacttt
cagtttatgctcaccttttttaactttttctatggtccagtgctcgaacaacactacatg
ccaaccaatgaaaacgatcgtcactttttcgtgccagatgtagaaccagccgacactgct
ccaggaagcatgagtgttggtgaaaagttccgtatcctctttgatctcatccaacaaatc
gatgtcttgggtgtctgtcctccaggtataaaagacaagaaccaaatggttgaattcttt
aaagaaagattcctcaacaaggttcaaatgactgctcgtggtgactttgtcgtttgtaga
ggtgtcgacccaaagaaaacattccgttatgactctgttccatacaaggtcaaacgtatg
gatggtaagcccgtccctctcgtcagtaatgaagcacccattataatgtgtactcatact
ggtgcatcgcttggtggtgaagagtactggtctctcaaacctcttctctactttaacaag
gatggcaatgaagaggatctcagtcgttggaacattgatccatatcttcccaaatctgat
gttgccccacgggaacatgcccctgttcgtgatgctcatctcgaggaacccattcatttt
gaagactatatcagaaagagaaagttacaggagcgtgatccactcgtccacaaagtctat
ggcattacaagtgaaatgcatgcaatggccaaggtcattgttcttgtctatcaaccagaa
ctaaagtggtgggcaaagatgtatgaattccaaaaatcatttgtctctatcaagaatgac
cttttactcagacaagtattcactcatccatcgaccaagatgatcaactctcttgtacca
caatcgtacaatatatttagagactatttgccttttgatggtgacaatcaaagattagag
tttttgggtgactctgtactcaagttttgtacaacctactatctctactttaagtatcca
caattaagagaaggtcaactcacttccaaacgtagtgagattacaagcaacagttatcta
ctctcaaaatgtgaacgttggaatgttgtagatctgcttcgttttactgtcaccgaagat
atgaaaaaaccaaaggccgatgtcatggaagcaatctttggagctctctttattgaacga
ggtgtaaaagaagcatatcaattcattgttcaaaatatctttcaagatcctgaattttct
caattcccagagtatctttgtagttgtatatctgaattacctccaagtagaagacaatct
aaatttttatttgatttaagaatcaatattaaaaaaacatgtcttttccaacagagtatg
acatgttctggtgatttggatagttatgaaagattggaatttttgggagatgcattttta
gatttggtgattagtaaacatctctatgatcaattcccagacaaacaagaaggctttttg
tcaacagctcgcgctggactcgtaaagaatgaggcattggcacagatcagtcaaaagatt
aatcttagtttggccatttcagatccacatattcattttacagtcaagagattgggtgat
ctcttggaagcatttattggatgtcttcttttggattgtggtatggaaaagactaaatat
tttattcatactcaattcaatttagcttcaaaagacactgtccttgaagcctatcgttta
gagtgtatctcttcaaaacagtttcagacaactaccacttctaccacctctaccacttca
actgccattccttcatcaccacaacaatacaatggaaataataataatgataatgctaat
agcatcggaatcgattctgtcattgaaagtttcgatgcaattaacatcaaacaacaacaa
aatggaacagattttgaacaagaagataatagtagtgatagttcttttgaatctgatgat
gatgatgaagaagaacataaagaaattcaaattatcaacaacaacaataataatgatgat
aataataataataacaattaa
DBGET
integrated database retrieval system
