Cavenderia fasciculata (cellular slime mold): DFA_00044
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Entry
DFA_00044 CDS
T02668
Symbol
cpsf4
Name
(RefSeq) CCCH-type zinc finger-containing protein
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
dfa
Cavenderia fasciculata (cellular slime mold)
Pathway
dfa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dfa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
DFA_00044 (cpsf4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dfa03021
]
DFA_00044 (cpsf4)
03019 Messenger RNA biogenesis [BR:
dfa03019
]
DFA_00044 (cpsf4)
Transcription machinery [BR:
dfa03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
DFA_00044 (cpsf4)
Messenger RNA biogenesis [BR:
dfa03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
DFA_00044 (cpsf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_2
Torus
zf-CCCH_4
zf-CCCH_3
Motif
Other DBs
NCBI-GeneID:
14871567
NCBI-ProteinID:
XP_004357761
UniProt:
F4PXF7
LinkDB
All DBs
Position
Unknown
AA seq
286 aa
AA seq
DB search
MLDGEVDTISLKLVFDFEPYVTEKNEIEVDEEDKDEVVHVQEPYINTCTSYIDNSGEICR
FFLKGNCTKGPDCPFKHTKTEHAVVCKHWLRGLCKKGDLCEFLHEYDLAKMPECYFFSKY
GFCPEGPKCKYGHPKWEVPKEDLESKQDIEKQQQSRLQSQQYNQQIISNISKQKQMLLQQ
QQDQENGIGGEDKMNIDNQNNNGNSNISNMNSGAGYTQMLGQQHSYGERGGRGGGGRGRG
GGRGRGGGRGRGGGVMGGGDQGGGGGGYQNFNQAPPPQFSYNQHYT
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgttggatggtgaagtagatacgatatcattgaaattggtattcgactttgaaccatat
gtaactgaaaagaatgaaatagaagttgatgaagaagataaggatgaagttgtacacgta
caagagccatatattaacacatgtacatcctatatagacaactctggtgaaatatgtaga
ttctttttaaaaggaaattgtacaaagggacctgattgtccgtttaaacacacaaagact
gaacatgctgtcgtctgtaaacattggcttagaggtttatgcaagaaaggtgatctatgt
gaatttcttcatgaatatgatttggcaaagatgcctgaatgttatttcttttcaaaatat
gggttctgtccagagggaccaaaatgtaaatatggtcatccaaagtgggaggtgccaaaa
gaagatttagaatcaaaacaagatatcgaaaaacaacaacagagcagactacaaagtcaa
caatacaatcaacaaatcatttcaaatatttcaaaacaaaaacaaatgttgttacaacaa
caacaagatcaagaaaatggtataggtggtgaagataaaatgaatatagataatcaaaat
aataatggtaatagtaatataagtaatatgaatagtggtgctggatatactcaaatgctt
ggacaacaacattcatatggagaaagaggtggtagaggtggtggtggaagaggtagaggt
ggtggacgaggtagaggtggtggaagaggtagaggtggtggtgttatgggaggtggagat
caaggaggaggaggtggaggataccaaaattttaatcaagctcctccccctcaatttagt
tataatcaacactatacataa
DBGET
integrated database retrieval system
