Cavenderia fasciculata (cellular slime mold): DFA_00218
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Entry
DFA_00218 CDS
T02668
Symbol
top3
Name
(RefSeq) DNA topoisomerase III
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
dfa
Cavenderia fasciculata (cellular slime mold)
Pathway
dfa03440
Homologous recombination
dfa03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
dfa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DFA_00218 (top3)
03460 Fanconi anemia pathway
DFA_00218 (top3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dfa03032
]
DFA_00218 (top3)
03400 DNA repair and recombination proteins [BR:
dfa03400
]
DFA_00218 (top3)
Enzymes [BR:
dfa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
DFA_00218 (top3)
DNA replication proteins [BR:
dfa03032
]
Eukaryotic type
DNA Topoisomerases
DFA_00218 (top3)
DNA repair and recombination proteins [BR:
dfa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
DFA_00218 (top3)
FA (Fanconi anemia) pathway
DFA_00218 (top3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_TOP3B
Zn_ribbon_recom
Zf_2nd_IFT121
Motif
Other DBs
NCBI-GeneID:
14871734
NCBI-ProteinID:
XP_004357934
UniProt:
F4PXY0
LinkDB
All DBs
Position
Unknown
AA seq
812 aa
AA seq
DB search
MKMKSSLFLLLLRVLFLLCFVKRMVANKVLNVAEKPSAAEEISQLLAGTRPRKRPGLSKY
NPIWEFKYNILGGNADMVFTSVLGHLMNTEVEERYIPWYSCEPVELFHCGVRKYIQSDDN
QNLFKTIQREARQCDTLVLWLDCDREGENIAFEVIDCAVKANRNLMIYRARFSSIIPQEV
KRACANLVRPNENDSIAVDTRIEIDLRLGAAFTRFQTLYLRGKFDLTPGNDEDKQPISYG
PCQFPTLGFVVERYLRIENFIPEDFWSMNVKHSKEELTVNFGWKRKRLFDHAPAFILYEK
CLDNPLATVIDIQKKNHNKLQKSASSKLRISSDRTMKIAEELYNKGFISYPRTETSQFID
GTDFQGLIGLQTGDPQWGQYATRLLNGEFKRPNDGRTNDHSHPPIHPTNFLPPGAAGAKD
PKARELYEFIVRHFLACCSPESIIAKTTVSIDVAGEKFSESGSMIIRRGYLEVYKYEKRN
DKIIPTYEVGEQFTPTDIKLESGRTVSPRPLSEPELLSAMDSNQIGTDATMAQHIQKIIE
RGYVIKDADQLFVPTNLGKALIVGYDSMGFEFSKPALRASIEADIQKIGLGQRTKEQVLR
DTIEKYKTLFIQAQNQTQMLDVAFSKHFASKGQTYQTLKANFSKCGKCNNLMDLKKTNGD
RKILNCSTCNTSYNLPQKGEFIVNAHTCPLCKFQVVSVQTDKTTYTICPFCRNHPPASSK
EGPGKPFHCFQCTEKCQLATGHNFKPNQNNNQNNQNNNNYQRNQNNNNNQNNNHNNRPQQ
PSSSTFKKKPAAPSSTFKNRYNDCNNNNIDLT
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgaaatcatcattatttttattattattaagagtactatttttattatgtttt
gtgaagagaatggtagcaaataaagttttaaatgtagccgagaaaccatcagctgcagaa
gaaatatcacaattacttgctgggacaagaccacgaaagagaccaggactaagtaaatat
aatccaatatgggaatttaaatataatatattgggtggtaatgcagatatggtgtttaca
tcggtattgggtcatttgatgaatacagaggtagaggaacgttatataccctggtattca
tgtgagccagtcgagttgtttcattgtggagtacgtaaatacattcaatctgatgacaat
cagaatctcttcaaaactatacaacgtgaagcaagacaatgtgatacactcgtactatgg
ttggattgtgatcgtgaaggtgaaaatattgcatttgaagtcattgattgtgctgtcaaa
gcaaatagaaaccttatgatctatagagctagattctcttctattatacctcaagaagta
aaaagggcatgtgcaaatttagttagaccaaatgaaaatgattcgattgcagttgatact
agaatagagattgatttgcgattgggtgcagcttttacaagatttcaaacattgtatctt
agaggcaagtttgatttgacaccaggtaatgatgaagacaaacaaccaatcagttatgga
ccatgtcaattcccaacactgggattcgtcgttgaaagatacttgcgtatcgaaaacttt
atacccgaggatttttggtcaatgaatgtaaagcattccaaagaggaacttactgtcaac
tttgggtggaagagaaaacgtctctttgatcatgctcctgcttttatcctctatgaaaaa
tgtcttgacaatcctttggcaactgttattgatattcaaaaaaagaatcacaataaatta
caaaaaagtgcatcatctaaacttagaatatcatccgatagaacaatgaagattgcagag
gaattatacaacaaggggtttattagttacccacgtacagagactagtcagtttatagat
gggactgatttccaagggttgattgggttacagaccggtgatccacagtggggacagtac
gcgacgagattgttaaatggagagtttaaacgaccaaatgatgggcgtacaaacgaccat
tctcatccaccaatccatccaaccaactttttgccacctggagctgccggtgcaaaagat
ccaaaggcacgtgaactgtacgagtttatcgttcgacatttcttggcgtgttgttcacca
gaatcaattattgcaaaaacaacggttagcattgatgttgcaggtgaaaagttttcagaa
tctggttcaatgattatacgtcgtggttatttggaagtgtataaatacgaaaagagaaat
gacaagatcatcccaacctatgaagtgggtgaacaatttacaccaaccgatatcaaatta
gagagtggacgaaccgtgtctcctagaccactctctgaacccgaactactctctgcaatg
gattctaatcagattggaacagatgccaccatggcacaacacattcaaaagattattgaa
agaggatacgttatcaaagatgcagatcaattgtttgtaccaaccaatcttggaaaggca
ttgattgttggttacgattcgatgggatttgaattctcaaaacctgcactacgtgcatcc
atcgaagcagacattcaaaaaattggtcttggacaaagaaccaaggagcaagttctccgt
gacacgatagaaaagtacaaaacactctttattcaagctcagaatcaaactcagatgttg
gatgttgcattctctaaacattttgcctccaaaggtcaaacctatcaaacattaaaagcg
aattttagtaaatgtggtaaatgtaataatttaatggatttaaaaaaaacaaatggtgat
agaaaaatattaaattgttcaacttgtaatacatcttataatttaccacaaaaaggtgaa
tttattgtcaatgcccatacttgtccactttgtaaattccaagttgtttcagttcaaaca
gacaagacgacctatactatttgtccattttgtagaaatcatcctccagcatcaagtaag
gaaggacctggaaaaccattccattgtttccaatgtacagaaaaatgtcaacttgcaaca
ggtcataattttaaaccaaatcaaaataataatcaaaataatcaaaacaataataattat
caaagaaatcaaaacaataataataatcaaaataataatcataataatagaccacaacaa
ccaagttcctcaacatttaaaaagaaaccagcagcaccatcctcaacttttaaaaataga
tataatgattgtaataataataatatagatctcacttga
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