Cavenderia fasciculata (cellular slime mold): DFA_00267
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Entry
DFA_00267 CDS
T02668
Name
(RefSeq) hypothetical protein
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
dfa
Cavenderia fasciculata (cellular slime mold)
Brite
KEGG Orthology (KO) [BR:
dfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dfa03016
]
DFA_00267
Enzymes [BR:
dfa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
DFA_00267
Transfer RNA biogenesis [BR:
dfa03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DFA_00267
Prokaryotic type
DFA_00267
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
14871514
NCBI-ProteinID:
XP_004357983
UniProt:
F4PY29
LinkDB
All DBs
Position
Unknown
AA seq
568 aa
AA seq
DB search
MLGLHTNKIRSLLLSTTSKSLLNCSKYTTTTSTAPHFTTDGSCDNNQEQQQINIFTGRQD
RSTPFKVKKDRFFDSPFQNKSTNNSEEAERWRKYQDERKTSFLDQCNQFYQDNKQTVETS
SGPFSFKAKTPVNMLFAYVGTGYHGLEFHMTDQDYPTLENCLERALFLSGMILPTNFGDP
SRLNWRRSSRTDKGVHSMSTIIKANLEIDRSRMLTPEKIADYVALINSNLPDALRIISME
MTKKSFDPRRQGIARTYHYVLPKKYLGDRYTLDEINQIILPMFIGNFSYHNFTLKRRTYI
RPNETTEDNNNNNNTKELEEEGEEEEIEEEEEIDNNNNNQQQQLNQKQFITNDKYYPKDR
NAEMSLFRRNSRNVRRVISFKLEETFQESGQEWVKFVIEGESFIQYQIRKMMGFVLAITN
GKTDLKTLELALHSPFSIHAPIAPPNPLYLFDCAFKQKRTAENSPLFHPFQLTNNRVNQF
KKDFCSNTLYPHLKQLNDTQQFFETFMDQELPIHKFGVEKEDLDNLFNMYIEFKEADLLR
RSKQEKEREEIKLEKEKEKEMEMEIKEN
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgttgggattgcacacaaacaagatacgatcccttctattatcaacaacatcaaagtca
ttattgaattgctcaaagtacacgacaacaacatcgactgctcctcattttacgacagat
ggtagttgcgacaacaatcaagaacaacaacaaatcaatatattcacaggaagacaagat
agaagtacaccatttaaagtaaaaaaagatcgattctttgattcaccttttcaaaacaaa
tcaacaaacaactctgaggaagccgaacgatggagaaagtatcaagacgagagaaagaca
tcgtttttggatcaatgtaatcaattttatcaagataataagcagaccgtagagactagt
tcaggtccattctctttcaaggcaaagacacctgttaatatgttgtttgcctacgttgga
acgggataccatggactagagtttcatatgaccgatcaagactacccaacactcgaaaat
tgtttagagagagctctctttctcagtggtatgatccttcctaccaactttggtgatcct
tcgagattgaattggagaagatcaagtcgaaccgacaagggtgtgcattcaatgagcacc
atcatcaaagcaaatttagagattgacagatcgcgcatgctcacacccgaaaagatagca
gactatgtagcattgatcaactcgaatcttccagatgccttgcgaatcatatcgatggaa
atgacaaagaaatcatttgatccaagacgacaaggtattgcacgaacataccattacgta
ctaccaaaaaagtatcttggtgatagatacacattagatgaaatcaatcaaatcatatta
ccaatgtttattggtaacttttcttatcataattttacattaaaaagaagaacttatatt
agaccaaatgaaacaactgaagataataataataataataatacaaaagaattggaggag
gagggagaagaagaagaaatagaagaagaagaagaaatagataataataataataatcaa
caacaacaacttaatcaaaaacaatttattacaaatgataaatattatccaaaagataga
aatgcagagatgtcattatttagaaggaattcaagaaatgttagaagagttatatcattt
aaattagaggaaacatttcaagagtctggtcaggaatgggtcaagtttgtcattgaagga
gagtcttttatacaataccaaattagaaagatgatgggttttgtattggccattaccaat
ggcaagacggatctaaagacattagagttggctcttcattctccattttcaatacatgca
cctatagctccacccaacccactctatctctttgattgcgcatttaaacaaaagagaacc
gccgaaaattctccattattccatccattccaactcaccaacaaccgcgtcaaccaattc
aaaaaggatttttgttccaataccctttaccctcatctcaaacaactcaacgacacgcag
caattctttgaaacctttatggatcaggaattaccaattcacaagtttggtgttgaaaag
gaggacctagacaatcttttcaacatgtatatagaatttaaagaggctgatttattaaga
agatcaaaacaagaaaaagaaagagaagaaataaaattggaaaaagaaaaagaaaaagaa
atggaaatggaaataaaagaaaattaa
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