Cavenderia fasciculata (cellular slime mold): DFA_00399
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Entry
DFA_00399 CDS
T02668
Name
(RefSeq) hypothetical protein
KO
K08991
crossover junction endonuclease MUS81 [EC:3.1.22.-]
Organism
dfa
Cavenderia fasciculata (cellular slime mold)
Pathway
dfa03440
Homologous recombination
dfa03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
dfa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DFA_00399
03460 Fanconi anemia pathway
DFA_00399
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dfa03400
]
DFA_00399
DNA repair and recombination proteins [BR:
dfa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
DFA_00399
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC4
WHD_MUS81
EME1-MUS81_C
SWIM
HHH
HHH_8
Motif
Other DBs
NCBI-GeneID:
14872761
NCBI-ProteinID:
XP_004358388
UniProt:
F4PRN9
LinkDB
All DBs
Position
Unknown
AA seq
989 aa
AA seq
DB search
MATVSSNQYLIAGLEAHRASTLSPTMARCYSRLINSVKSYPLPITIDEIESVSGIGRATG
KILRTLIENGPLSSLSSNQQNQQLITNNNNNSRGELEKQKLKERLEKINIKDLFVKSDDF
LAMKRPNSFAEWIYSIKGITDPTDIIDKFNLSGINQIQHIPLIDGSATSAANLIFGQKML
VDHAVTIYKRYDMLAIEYAERGEDLETALQWIKGEISSNDGDDDIDNKNLFFSDKDGEDI
LISTEGPPPLIQMQYIETICSKNVLKGAYEIAHMRKLADIHLGSDNIIKLMVSPSGDDNV
QGRGDKAYEVIITLDPDRKMASRCSCTCEYGKIHNHRKNINSSLCKHIIAPLLILSQYNQ
QNNSQNNSNQNSQNNQNNQNNNNSTPRRNPTRPRNNNSIYLQDGMDLELGDEDEYIPPED
KDDRDYSPTRDKQSRKRSSLATSTNNGSQQENDQKRTRRRSTEQQTTDKSTNNNNSKKNR
YRPKYRSGAWGLLMALYAKLVDEENSKDGLSKNELVMNAQEYSDAQFSTDGGWRSMKTLE
DHQLVSEYGKPKIFKLTKMGWDIARKLYSSKPTGTKNITMAVNSDDDGDNDDNDNDDNDN
DDYDIHSQQDNEDSPTKTTITTTNEDFNQEPSPPPLSMEEQVLYDWSDDSDSETIHWLVD
RPFPITHSDVLKIKKENIYIREVVLLVDNREIKNHRKNGDSLLQLLNTVGVKYEQRALPL
GDFLWITRLHYNLDEEQTVYEMVMDTIIERKKIPDLLESIKDGRYKDQKYRLTRCGIDKT
HYLIEGQLNYRTNGGGGGGSGSQDTTVTPKDPDDEKVYQSISETFLEDEIIPVRTKSEED
TVHMLRTITTRMTDNPHIYFSDMCYDEFADRATHEPMTITSMFACMLLTIRGMTEKKATQ
IITEYPTLHRLITKYRRMTTVGEAERLLADYVGVDLNTPAANIEIFYILTCLGHSSLSLL
LLLYCIIILDSSRSNGRKEKEASGYKQQQ
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atggcgactgtgagttcaaatcaatacctcattgctggattagaagcacatcgagctagt
acactcagtcctacaatggctcgatgttatagtagattaatcaattctgtaaagtcttat
cctttacctataacaattgatgagattgaatctgttagtggtattggaagagcaacagga
aaaatattaagaacacttattgaaaatggtccattatcttctttatcatcaaatcaacaa
aatcaacaactaataacaaataataataataatagtagaggagaattagagaaacaaaaa
ttgaaagaaagattggaaaagataaatataaaagatttgtttgtaaagagtgatgacttt
ttagctatgaaacgtcccaatagctttgcagaatggatttatagtatcaagggaataaca
gacccaacagatattatagataaattcaatcttagtggtatcaatcaaattcaacatatc
cctttgattgatggtagtgcaacttctgctgccaacttgatatttggacaaaagatgctc
gttgatcatgctgtcaccatttacaaaagatatgatatgttggcaatcgagtatgctgaa
agaggtgaagatctagagactgcactacaatggatcaaaggtgagatcagtagcaacgac
ggcgatgatgacattgacaacaaaaatcttttcttttccgataaagatggtgaagatatc
ttaatttcaactgaaggtcctccaccattaattcaaatgcaatatattgaaactatttgt
tcaaaaaatgtattaaaaggtgcatatgaaattgcacatatgagaaagttggcagatatt
catctgggtagtgataatatcattaaattaatggtttcaccgtcgggtgatgacaatgtt
cagggaagaggtgacaaggcatatgaagtcattatcacattggaccctgaccgaaaaatg
gcttctaggtgttcgtgtacttgtgaatatgggaaaatacacaatcatcggaaaaatata
aactctagtctttgtaaacatatcattgctcccttacttattttatctcaatataatcaa
caaaataatagtcaaaataatagtaatcaaaatagtcaaaataatcagaataatcaaaat
aataataattcaacaccaagaagaaatccaacaagaccaaggaataataatagtatttat
ttacaagatggtatggatttggaattgggagatgaagatgaatatataccaccagaagac
aaggatgatcgtgattactctccaacaagagataaacaatcaagaaaaagatcttcactt
gctactagtacaaataatggttcacaacaagaaaatgatcaaaaaagaactcgtagaagg
agtactgaacaacaaacaaccgataaatcaacgaataataataatagtaaaaaaaataga
tatagaccaaaatatagaagtggagcatggggattattaatggcattgtatgctaaatta
gttgatgaagaaaattcaaaagatggtttatcgaaaaatgaattggtcatgaatgctcaa
gaatattctgatgcacagtttagtactgatggtggttggagatcaatgaaaacgttagag
gatcatcaattggtatcggaatatggtaaaccaaaaatattcaaacttacaaagatggga
tgggatattgctagaaagttatattcttcgaaaccaactggaacaaaaaatataacaatg
gctgtaaatagtgatgatgatggtgataatgatgataatgacaacgacgataatgacaat
gacgactatgatatacatagtcaacaagacaatgaggatagtccaacaaaaacaacaatt
acaacaacaaatgaagactttaatcaagaaccatcaccaccaccactttcaatggaggaa
caagtattgtatgattggagtgatgatagtgatagtgaaactattcattggcttgtagat
agaccattcccaattactcatagtgacgttttaaagattaaaaaagagaatatctatatt
agagaggttgttttgttggttgataatcgtgagattaaaaatcatcgaaagaatggagac
tcgttgttgcagttgctcaatactgtgggcgtcaaatacgagcaacgggcactacccctc
ggcgattttctctggatcacacgtctccactataatctcgatgaagaacagacagtctat
gaaatggtgatggacacaatcatcgaacgcaaaaagataccagacttgttggaaagtata
aaggatggaagatacaaagatcaaaaataccgtctcactaggtgtggtatagacaagact
cattatctaatcgaaggtcaacttaattatcgaactaacggtggtggtggtggtggtagt
ggtagtcaagacacaacagtcactccaaaagatccagatgatgaaaaagtctatcaaagt
atttcagaaacattcctcgaggatgaaatcattccagtaagaaccaaatcagaagaagat
acagttcatatgcttcgaaccatcacaacaagaatgacggataatcctcatatctacttt
agtgatatgtgttatgacgagtttgcagatcgtgccacacacgagccaatgaccatcaca
tcaatgtttgcttgcatgttactcactattcgtggcatgactgaaaagaaagcgacacag
atcatcacagaatatcctacattacacagactcatcacaaagtatcgacgcatgactaca
gttggagaggcagaacgactcctagctgattacgttggagtagatctaaatacaccagca
gctaacatagagattttctatatcttaacttgcctaggtcattcatcattatcattatta
ttattgttatattgtattataatattagattcaagcagatcaaatggaagaaaagaaaaa
gaagcaagtggttataaacaacaacaataa
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integrated database retrieval system
