KEGG   Cavenderia fasciculata (cellular slime mold): DFA_00417
Entry
DFA_00417         CDS       T02668                                 
Symbol
ubqD
Name
(RefSeq) ubiquitin
  KO
K02977  ubiquitin-small subunit ribosomal protein S27Ae
Organism
dfa  Cavenderia fasciculata (cellular slime mold)
Pathway
dfa03010  Ribosome
dfa04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:dfa00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    DFA_00417 (ubqD)
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    DFA_00417 (ubqD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:dfa03011]
    DFA_00417 (ubqD)
   04121 Ubiquitin system [BR:dfa04121]
    DFA_00417 (ubqD)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:dfa04147]
    DFA_00417 (ubqD)
Ribosome [BR:dfa03011]
 Ribosomal proteins
  Eukaryotes
   Small subunit
    DFA_00417 (ubqD)
  Archaea
    DFA_00417 (ubqD)
Ubiquitin system [BR:dfa04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   DFA_00417 (ubqD)
Exosome [BR:dfa04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   DFA_00417 (ubqD)
  Exosomal proteins of colorectal cancer cells
   DFA_00417 (ubqD)
SSDB
Motif
Pfam: ubiquitin Ribosomal_S27 Rad60-SLD Ubiquitin_2 Ubiquitin_4 Rad60-SLD_2 DUF2604 Ubiquitin_5 Dsc3_N UBL_UBAC1 TBK1_ULD DNMT3_ADD_GATA1-like DUF7571 Cytochrome_C7
Other DBs
NCBI-GeneID: 14872801
NCBI-ProteinID: XP_004358406
UniProt: F4PRQ7
LinkDB
Position
Unknown
AA seq 162 aa
MKEDSEMQIFVKTLTGKTITLEVEGSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR
TLSDYNIQKESTLHLVLRLRGGGGKKKKKKNYATPKVIKRKPKKVKLAVLKYYKFDENGK
IRRTLRECTNCGAGVFMAQHANPARQYCGKCHTTLVKVEKTN
NT seq 489 nt   +upstreamnt  +downstreamnt
atgaaggaggattccgaaatgcagatcttcgttaaaacactcacaggtaagaccattacc
ttagaggtagagggttccgacactatcgaaaacgtcaaggctaagatccaagacaaggaa
ggtatcccacctgaccaacaacgtcttatctttgccggtaagcaactcgaagacggtcgt
accctctccgactacaacatccaaaaggagtctactctccatctcgtcctccgtctccgt
ggtggtggtggtaagaagaagaagaagaaaaactatgccaccccaaaggtcatcaagaga
aagccaaagaaagttaagttggccgtcctcaagtactacaagtttgacgaaaacggtaag
atccgtcgtactctccgtgaatgcaccaactgtggtgctggtgtcttcatggcccaacac
gccaacccagctcgtcaatactgcggtaaatgtcacaccactctcgtcaaggttgaaaag
accaactaa

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