Cavenderia fasciculata (cellular slime mold): DFA_00548
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Entry
DFA_00548 CDS
T02668
Symbol
nup54
Name
(RefSeq) nucleoporin 54
KO
K14308
nuclear pore complex protein Nup54
Organism
dfa
Cavenderia fasciculata (cellular slime mold)
Pathway
dfa03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
dfa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
DFA_00548 (nup54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dfa03019
]
DFA_00548 (nup54)
Messenger RNA biogenesis [BR:
dfa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
DFA_00548 (nup54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
14873760
NCBI-ProteinID:
XP_004358537
UniProt:
F4PSE1
LinkDB
All DBs
Position
Unknown
AA seq
465 aa
AA seq
DB search
MTTLGSAGGGSSLFGGGGSTGGSSLFGGGGAAAVPSLSLGSTAGGSLFGGAAGGAGTGGG
GLFGGGGGAAPTPTIPSLSLGSLSGGGGGGGGGLFGTSSTTQQQQQPAQQTSSLGGGLGG
GGLFGAPTSSSSLFPSAQPQQQQPTQQTSSLFAGAASSLAGPPSSTSLFGQPQQQQQQSS
LFQQPQQTQQLQQSSLFATPQQQQQLQQQQLLQQQQQQQTGVRTVETKIAELIQSINPES
PNCKFLYWFFNYAGQKLDPSKIPKPTYLSDEQWTYINSQNPDPTMFVAVAARSFDDLIKR
KTVQKLNIDKLHESTIDTLKHIKELQNYLNLQIQSQLETMRKKNIELLHKYIEVWSKVEC
YNGKAKSVTSAEEQLLRRVKMIGEALSQPSTNSIKNRVEELSNQLIIRNMAQRDNVNFQL
DTNSLESLYTVFKNMTAAIENMSSDLENSLQDAEILKNELAKLRQ
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgacgacactaggatcagcaggtggaggttcatctttgtttggtggaggtggttcgaca
ggtggatcatcgttgtttggaggaggtggtgctgccgcagtaccatcattgtctttggga
tcgacagctggaggttcattatttggtggagctgctggaggtgcaggaacaggaggagga
ggattgtttggtggaggaggaggagcagctcctacaccaactataccatcactatcatta
ggatcattgtcaggtgggggaggaggaggaggaggaggtttgtttggaacatcttctact
actcaacaacaacaacaacctgctcaacaaacatcttcgttaggtggagggttaggagga
ggaggactatttggtgcaccaacctcttcatcctctctatttccttcagcgcaaccgcag
caacaacaacccactcaacaaacatcatcattattcgcaggtgctgcttcttcgttggca
ggtccaccatcatcaacctctttgtttggtcaacctcaacaacaacaacaacaatcatca
ttatttcaacaacctcaacaaacacaacaattacaacaatcatctttattcgcgacacca
caacaacaacaacaattacaacaacaacaacttttacaacaacaacaacaacaacaaact
ggagttagaacagttgaaactaaaatagctgaattaatacaatctataaatcctgaaagt
cctaattgcaaatttttatattggtttttcaattatgctggacaaaagttagatccaagt
aaaatacctaaaccaacctatttaagtgatgaacaatggacatatatcaattcacagaac
cccgatccaaccatgtttgttgcagttgccgctcgatcatttgatgatctaattaaaaga
aaaacagtacaaaaattgaatatcgataaattacatgaatcaactattgatacattaaaa
catattaaagaattacaaaattatttaaatttacaaattcaatcacaattggaaacaatg
agaaaaaagaatatcgaattattacataaatatattgaagtgtggagcaaggtggaatgt
tacaatggtaaggccaagtcggttacatctgccgaagaacaattattgcgtcgtgtcaag
atgattggtgaggcattgtcacaaccatcgaccaactcgatcaagaatcgtgtcgaagaa
ctcagtaaccaattgatcattcgaaatatggcacaacgtgacaacgtaaacttccaactc
gatactaattcattggaatccctctacactgtatttaaaaacatgactgctgccattgaa
aatatgtcttcagatttggaaaattctttacaagatgctgaaatattaaagaatgaattg
gcaaaattacgtcaataa
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