Cavenderia fasciculata (cellular slime mold): DFA_00597
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Entry
DFA_00597 CDS
T02668
Symbol
taf5
Name
(RefSeq) transcription initiation factor TFIID subunit
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
dfa
Cavenderia fasciculata (cellular slime mold)
Pathway
dfa03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
dfa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
DFA_00597 (taf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dfa03021
]
DFA_00597 (taf5)
03036 Chromosome and associated proteins [BR:
dfa03036
]
DFA_00597 (taf5)
Transcription machinery [BR:
dfa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
DFA_00597 (taf5)
Coactivators
SAGA/TFTC/STAGA complex
DFA_00597 (taf5)
Chromosome and associated proteins [BR:
dfa03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
DFA_00597 (taf5)
STAGA complex
DFA_00597 (taf5)
TFTC complex
DFA_00597 (taf5)
SAGA complex
DFA_00597 (taf5)
SLIK complex
DFA_00597 (taf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
WD40_Gbeta
TFIID_NTD2
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_C
Beta-prop_Aladin
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
NBCH_WD40
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_WDR41
Beta-prop_IFT140_1st
Beta-prop_SCAP
RMC1_N
Tricorn_2nd
Beta-prop_Vps41
LisH
WD40_RFWD3
Beta-prop_DCAF4
LisH_PAC1
Beta-prop_VPS8
LisH_2
Beta-prop_HPS5
WD_LRWD1
Beta-prop_WDR35_TULP_N
Cytochrom_D1
WD40_like
Mucin
Beta-prop_DCAF12
WDR54
Motif
Other DBs
NCBI-GeneID:
14873856
NCBI-ProteinID:
XP_004358584
UniProt:
F4PSP2
LinkDB
All DBs
Position
Unknown
AA seq
888 aa
AA seq
DB search
MNTSTPPQNTTPTTPSSSSSSSSSTTTTTTNTTTAPPSTNVAVAVPVVASSSTNSNTTTV
VTSPSSSTSSTTNPIVPTTTSSVTSPSTPGNNVTVSTPSPNSMANIIGTPTTMTNSLAAA
SQTTPTPSPTTTTTTNTTTAPTTTTITTILSSSSSTSSPTPSTAREKEIDLAVLEYLRKR
GYSNAESVFKQESNLDDPAISEGGSGSGSSNTTTATSSNSHTNGTTGASGASSSSNSELD
VSNISQYLLFYNQKEYLNPQKYMDSYVKLRNWIHQSLDIYKYEFLSLLYPVFVHCYIDLI
SKGYSEEAIELMEKLGPEHEEFYGDDLKLLRGIRNSDHLKENELAYTFRNNRWNLKMCAY
SFELLMAFLHESKFIPIISIINQYFNIKVINTRPGILDDENLISGQSEIDTSNVNSVPIY
SGLFKPDDEEEDEEKSKKLKKKKPTKEDDRLCRSKSNVPLPKFTDAFEAELNNDISKCVS
LSASSLPSICCFTFFNTYQGLNSIDIARDASMVVGGFSDSSVKLWNLKELAEGGGSSSNV
VNTDLSSLEQSNSSSNKRKTISSSTTSTTTTTTTSTSSTSNSTSSSSSTSNIDSHFKTFV
GHSGPVYGTSISPDNQFILSCSEDCTTRLWSLETMSNLVCYKGHNYPVWDVQFSPYGYYF
ATASHDKTARLWSTNYLSPLRIFTGHLSDVNSVKFHPNINYLATVSSDKSVRLFEAHTGK
CVRIMMGHRAPVYSLAFSPDGRFLATGGEDSSVILWDLSTGRKMKTLEGHAKTVHSLDFS
MDGNLLASASTDSTVRLWDVNKALTSSLSVNGQPIIETPTSKSMGGSSQQNAANKKSRLK
QKRVSPELIETYPTRQTPIFNVTFSRRNLLLTSGPLTNLSSMSYLTTF
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgaatacctctactcctcctcaaaatacgacaccgactacaccatcatcgtcatcatca
tcatcatcatcaactacgactacgacaactaatactactactgcacctccttcaaccaac
gttgctgttgctgtacctgtagtagcatcatctagtactaatagtaatactacgacggta
gtaacttcaccatcatcatcaacatcatcaacaacaaatcctatagtacctacaactaca
tcatcagtgacatcaccatcaacacccggaaataatgtaaccgtttcaacaccttcacct
aattcaatggctaatatcattggaactccaacaacaatgactaatagtttagctgctgct
tctcaaactactcctactccttctcctacaaccacaactacaactaatactactactgct
ccaacaacaacaacaattacaacgattctatcatcatcatcatcaacatcatcaccaaca
ccatcaacagcaagagaaaaagagattgatttggcagtactagagtatctaagaaagcga
ggctactctaatgccgagagtgtatttaaacaagaatcaaatttggatgatcctgcaata
tcagaaggtggtagtggtagtggtagtagtaatacaactactgcaacatcatcaaatagt
catacaaatggtactactggagcaagtggtgcatcatcatcttcaaatagtgaattggat
gtcagtaatatatctcaatacctcttattttacaatcaaaaagagtatttgaatccacaa
aaatatatggatagttatgtaaagttgagaaattggattcatcaatctttggatatctat
aaatacgaattcctatcacttttatatcctgtatttgttcattgttatattgatttaatt
tcaaaaggttattctgaagaagcaatagaattgatggaaaaacttggacctgaacatgaa
gaattttatggtgatgatttaaagttgttacgaggtattagaaatagtgatcatttaaag
gaaaacgaattggcatatacatttagaaacaatagatggaacttaaagatgtgtgcctat
tcatttgaacttttaatggcatttttacatgaatctaaatttattccaatcattagtatt
ataaatcaatattttaatattaaagttataaatacaagaccaggaatattagatgatgaa
aatttaatatctggacaaagtgaaattgatacaagtaatgtaaattcagttcccatttat
agtggattgttcaaaccagatgatgaagaggaggatgaagaaaaatcaaaaaaattaaag
aaaaagaaaccaaccaaagaagatgatagattatgtagatcaaaatcaaatgttccttta
ccaaaatttactgatgcatttgaagcagaattaaataatgatatatcaaaatgtgtatct
ttatcagcatcttcattaccatcgatttgttgttttacatttttcaatacctatcaagga
ttaaatagtattgatattgctagagatgctagtatggtagttggtggattttcagattca
tctgtaaaattgtggaatttaaaggaattggctgaaggtggtggatcgtcgagtaacgtc
gtaaatacagatttatcatcattggaacaatcaaatagttcatcaaacaaaagaaaaaca
atttcatcatcaactacttcaactactacaactactacaacttcaacttcatctacttct
aattctacttcttcatcttcatctacatcaaatattgatagtcattttaaaacatttgtt
ggacatagtggaccagtttatggaacttcgattagtccagacaatcaatttattttatca
tgttcagaggattgtaccactagactttggtcattagagaccatgtccaatttagtgtgt
tacaagggtcacaattacccagtttgggatgtacaattctcaccctatggatattacttt
gcaaccgccagtcacgataaaacagctcgtctttggtcaaccaattatctttcaccttta
agaatttttactggtcatttatctgatgtaaatagtgttaaatttcatccaaatataaat
tatttggcaactgtatcaagtgacaagtctgtaagactttttgaagcacatactggaaag
tgtgtacgtattatgatgggacatagagcacctgtatacagtttggcattctcaccagat
ggacgattcttggcaaccggcggtgaggatagtagtgtcatcttgtgggatttatcaact
ggaagaaaaatgaaaacgctagagggtcacgccaagactgttcatagtcttgacttttca
atggatggaaatcttttggcgtcggcatcgaccgattcaacggtacgtctttgggatgta
aacaaagcacttacaagcagtctcagtgtcaatggacaaccgattatcgaaacaccaacc
agcaaatcaatgggtggatcatctcaacaaaatgcagccaacaaaaaatccagactcaaa
caaaaaagagtatcaccagaattaatcgaaacctatccaaccagacaaactcctatattt
aatgtaacattctctagaagaaatttattattaacttctggtcctttaacaaatttatct
tcaatgtcttatttaactactttttaa
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integrated database retrieval system
