Cavenderia fasciculata (cellular slime mold): DFA_00766
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Entry
DFA_00766 CDS
T02668
Symbol
dhx16
Name
(RefSeq) DEAD/DEAH box helicase
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
dfa
Cavenderia fasciculata (cellular slime mold)
Pathway
dfa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dfa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
DFA_00766 (dhx16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dfa03041
]
DFA_00766 (dhx16)
Enzymes [BR:
dfa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
DFA_00766 (dhx16)
Spliceosome [BR:
dfa03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
DFA_00766 (dhx16)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
WHD_HA2
HA2_C
Helicase_C
DEAD
AAA_22
AAA_19
AAA_30
YqbF
ABC_tran
Motif
Other DBs
NCBI-GeneID:
14873786
NCBI-ProteinID:
XP_004358749
UniProt:
F4PTL7
LinkDB
All DBs
Position
Unknown
AA seq
1110 aa
AA seq
DB search
MDKDTKIWLSDKVFDILEYREANLVDYIYALSKKSNGDVTKLMDKLKDNDFPINDKTRSL
AQELIKRTTPTSSSTSSSSSSSATGKVTMFGTAGITLQSTKNIVSSTSKEKEAMDYLRKN
KTFKLVQNNNNNDDQSSSSSSDEEERKRKKKEKKEKKEKEKEREKEHTTTTSTSSSKSKE
KITRKSSSTGWEDDDNDDDSTTTTTVNVQKQKDITSSSKSKKEEELEREEEDEYEREQRE
IQEYNERLRKRDERNTKKIEPKESKESERRKRLEQEQDTLDKERIQSRRKFLVGEEQKRL
ILLKRELEDEYELFKNEKLTKKEIEDFERKKKLYEIASQRINDVVVDDYYRMPSSEFNQD
GKIDRKNREMDLLKPRWETDKQGSSTSYNPEQKEWEANRLAMAMEEPRGSRKQPQEEEYE
YVFEDQIQFIKESVITGKDDAANLLGVLPGSAAADPQVTKKMSIAETRKSLPVFPYREDL
LAAVEEYQILIIVGETGSGKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSVAARVAEEI
GCKLGHEVGYSIRFEDCTSDKTKLQYMTDGMLVREFLTSPDLASYSCLIIDEAHERTLHT
DILFGLIKDIARFRPDLKLLISSATLDADRFSEYFDDAPIFNIPGRRFEVVPHYTQAPEA
DYLEASVVTVLQIHVTEPLGDILVFLTGQEEVDAAAELLQQRTRGLGSKIKELVITRIYS
TLPTDLQAKIFEPTPPGARKVVLATNIAETSLTIDGIVYVIDPGFCKQKNYNPRTGMESL
VITPVSKASANQRKGRAGRVAPGKCFRLFTAWAYENELEENTIPEIQRTNLGNVVLMLKS
MGINDLVNFDFMDPPPPETLIKALEQLYALGALNDRGQLTKLGRRMAEFPLDPQLSKMIL
ASEKYKVTEEILTVAAMLSVNNTIFYRPKDKAFQADAARKNFSHPQGDHLTLLNVYNQWR
EAGYSVQWCYENFIQNRSMKRAQDVREQLVGLMERVEINVESNPDDSESIRKSIASGFFY
HTAKLDRTGLYRTTKYNQSVQIHPSSSMFQTTPKWVIYHELVQTTKEFMRQVIEIQPQWL
VEIAPHFYKEKDIIENQKLPKSIGRSQINK
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atggataaagatacaaagatatggttatcagataaagtatttgatatacttgaatataga
gaagctaatttggtagattacatctatgcactatctaaaaagtcaaatggtgatgttaca
aaattgatggacaagttaaaggataatgactttccaatcaatgataaaacaagatcactt
gctcaagaattgattaaacgtacaactcctacttctagttcaacatcatcttcctcgtca
tcatctgcaactggaaaggttacaatgtttggaacagctggtattacattacaatcaact
aaaaacattgtatcatcaacatcaaaagaaaaagaagcaatggattatcttagaaagaat
aaaacttttaaattggtacaaaataataataacaatgatgatcaaagtagtagtagtagt
agtgatgaagaggaaagaaaaagaaaaaagaaagagaaaaaagaaaaaaaggaaaaggaa
aaggaaagagaaaaggaacatactactactacttctacttcttcttcaaagagtaaagaa
aaaataacaagaaagagttcttctactggatgggaagatgatgataatgatgatgattcg
acgacgacgacgacggtcaatgtacaaaaacaaaaagatataacatcatcatcaaaatca
aaaaaagaagaagaactagaacgagaagaggaagatgaatatgaaagagaacaaagagaa
attcaagaatataatgaaagattaagaaaacgtgatgaacgtaatacaaagaaaattgaa
ccaaaagaatcaaaagaatcagagcgacgaaaacgtttagaacaagaacaagatactttg
gataaagaacgtattcaatcaagaagaaaatttttagttggagaagaacaaaaaagatta
atattattaaaaagagaattggaagatgaatatgaattattcaagaatgaaaaattgact
aaaaaagagattgaagattttgaaagaaagaaaaaattgtatgaaattgcaagtcagcga
atcaacgatgtagtggtagacgactattatcgaatgccatcatcagagtttaatcaagat
ggaaagattgatagaaagaatagagaaatggatttattaaaacctcgttgggaaactgat
aaacaaggatcttcgacatcttataatccagaacaaaaagaatgggaagcaaatagattg
gcaatggcaatggaagaaccacgtggaagtagaaaacaaccacaagaagaggaatatgaa
tatgtatttgaagatcaaatacagtttattaaagagtcggttatcactggtaaagatgat
gctgccaatttattgggtgttttacctggttctgctgctgcagacccacaagtaactaaa
aaaatgtctatcgcagagacacgtaaatcactgccagtatttccatatcgagaggattta
ttggctgcagtggaagaataccaaatccttattatagtcggtgagactgggtctggaaag
actacacaaatcccacaatatttacacgaagctggatacactaaacgtggtaaagttgga
tgtacacaacctcgtcgtgttgctgctatgagtgtggcagcacgtgttgcagaagagatt
ggatgtaaattgggtcacgaggttggttattccatccgtttcgaagattgtacatctgac
aagaccaagttacagtacatgactgatggtatgttggtaagagagtttctcacttcacct
gacctcgccagttacagttgtctcattatcgatgaagctcacgaacgtactctacacact
gacattttattcggtctcatcaaggatattgcaaggtttagacccgacctcaaactattg
attagtagtgctactctggatgctgatcgtttttcagaatactttgacgatgctcctatt
ttcaatataccaggacgtcgttttgaagtagtacctcattatacgcaggcaccagaggca
gattatctagaggcaagtgttgtcactgttctccagattcacgtcactgaaccattggga
gacattttagtctttttaactggtcaagaagaggttgatgcagctgccgaactattacaa
caacgtacaagaggacttggatcgaaaatcaaagaattggttattactagaatctattct
acactgccaaccgatttacaggcaaagattttcgaaccaactccacctggtgctagaaag
gtcgtgttggcaactaatattgcagagacgtcgctgacgattgatggtattgtctatgtc
attgatccagggttttgtaaacaaaaaaattacaatcctagaaccggtatggagtcactt
gtcattacgccagtctcgaaagcatcagccaaccagagaaagggacgtgctggacgtgtc
gcaccaggtaaatgcttccgtctatttacagcatgggcatacgagaatgaactagaggaa
aatacaataccagagattcaacgaaccaaccttggtaacgtagtactgatgttaaagtca
atgggaattaacgatctcgtcaactttgattttatggatcctccacctcccgaaactctc
atcaaggcgttggagcagctctatgcactcggtgcactcaatgaccgtggacaattgacc
aaactcggtcgtcgtatggcagagtttccacttgaccctcaactaagcaagatgatcctc
gcatctgaaaagtataaagtgacagaggagattttgacagtggctgccatgttgtcggtc
aacaataccattttctatcgtcccaaggataaagcattccaagccgatgccgccagaaag
aacttttcacatcctcagggtgaccatctcaccctactcaacgtctacaaccagtggcgt
gaagccggctactctgtacaatggtgctacgaaaattttatccaaaacagatcaatgaaa
cgtgcacaagacgtcagagaacaactcgtaggactcatggaacgagtagagattaacgtt
gaatcgaatccagacgactctgaatctattagaaaatcaattgcatctggattcttttat
cacactgccaaactcgatagaactggtctctatcgtaccaccaaatacaatcaaagcgtc
caaatccatccatcgagctcaatgtttcaaactacacccaaatgggtcatctaccatgaa
ctcgtacaaacgacaaaggaatttatgcgccaggtcattgaaattcaacctcaatggctc
gttgaaattgctcctcatttctacaaggaaaaggatattatagaaaatcaaaaacttcca
aaatctattggtagatctcaaattaataaataa
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integrated database retrieval system
