Cavenderia fasciculata (cellular slime mold): DFA_00903
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Entry
DFA_00903 CDS
T02668
Name
(RefSeq) U3 snoRNP protein
KO
K14550
U3 small nucleolar RNA-associated protein 10
Organism
dfa
Cavenderia fasciculata (cellular slime mold)
Pathway
dfa03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
dfa00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
DFA_00903
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dfa03009
]
DFA_00903
Ribosome biogenesis [BR:
dfa03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
DFA_00903
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BP28CT
U3snoRNP10
HEAT_EF3_N
DUF5742
Motif
Other DBs
NCBI-GeneID:
14872654
NCBI-ProteinID:
XP_004358883
UniProt:
F4PUG1
LinkDB
All DBs
Position
Unknown
AA seq
2231 aa
AA seq
DB search
MDQDQHLQKLQEKRKNRETNGRKGAKFGPKKRSELDRQLEVIKYNARVIGNLNKRETVLF
GDANTAGTVDYDSILDLGKEGLRELTKLDSRFKSFEKNLFANSSRDENRMMMTKDQTKVL
DESIDSFLRLLSAYYLLMPAQQCLEWLIRRYRINEFNLDQLLMCTLPYHQSNAFAQLLSI
LRYESDKKWRFLIVFRHNKVTITRDYLVGLLHKNAFFLDLVCSTILKYEKTNTLNKTMIS
FFTALMVDAVSVGTLTDQFIRTVLPCLNFSLKSKNLDLQLGSFMILSNIASKVQFSKDVL
ELLIRNTLLNHSTSITASFTFLLVLFQRQNFKSLSNSNLELLVSIPALKEIMLDLHSQNK
SLDRMITLMVVYLCDSFDINENSRSLLELFVKDLPTSEKIHQIIVSRLLNRYINNFQKID
LQDNQNENETTEEKKQSSTDSSSASVDSMEIDVEEKESKMSEIIHFIEPRLVQEIINSTL
STNMSNQQQDKQNLVLSFQEKVFAQRVVSSSSATTLYLKLQSPVIENRLSGLAILKEQIE
KGASDVTSFANVLGDRLSDEDDNVTLAAWGLPNLVQLFGGNGSTLVNAAGECFAMGSLST
STKVFVLDTLIKIQSTHPFGQDTSNRLCQILLENLVFGNKKDQDEIKLRTTILKSFNDIK
ECSPYFRISSTPTSPITSNLLLVKSLSANITKQSSNQDNIQLFKSIFIQSSENYLSNDKL
IILLSISNSIFNLKSKEEKIEFTNIIIEFLKIYLKECLEDCNTDGIIENDITLEQICNEM
TLYEEEQQDNDYYVHALFYCIDVVINSFTPIESSELFIKELQNLNAGMSFTSATTKSNNV
TNHLIHILISLFNLLFESMTTLTQHSDNLESFLQQIIKRYLPNHIVLLKFLSIFWSDKLF
NSTIQETALSLCNCFLESKSFKKYSMNQSILCLFLLPLVSSHRNVREAAGQCIKSIEKSV
NNAANNTPQQTSVVTLFEEEKSLLLMSGKLYGNLLGTLVDYMNELVMDNTFMCTLVPSII
MSTDNSELTKEQSDSVCSYLITVPLLYENNANRSALWSALSTINDPIFLSTLSTYTHSLL
KLYEQENLTSEQSSILNVLLLQLVQDYSLESKKNNHLALLYKVLSYSNGITLVGATDNQK
YRILDIVLPRLTSTLLNALPTKEQTKIVEAVLDLLHSSTDIECRQLAAESLHSIMIDSTC
ILTILSNIQVSQTSIPRITAIMETIKENASSIKKIAVLLKPTLSILKQLNQVKSIGAAST
EYCKQVLITTILSISESFFKSDIELFSELFDISIILKCVESSGDLQTRNCALALLSRVAH
HAPKHLFEEFGNILEMIKSALVKQDAPTFRILCGFLGGVVPSIVNNKDLSSSSKININSI
FGLFLEHFKQISNDYCVPLFLTMIQSIDYQKLDLLFVQMLVKRINLLRTINEVESKPKTA
ADLEKEKQMEKEQLGDYIQQANPTSSQQQQLESFNKFIEQLCDCIPAAKISRALSVLAKI
SSLISLEKAEFIEDNNDLGFNDKEVISLLHSKKDNRLLQTMILEFIEERLSSNSYLENLT
FKSNKQEKEQIEQCYLKSFANLLILLRQTTEFSERIKSTTDQSSKGKEKFLKKILASIHK
CMDKLNQLMSVDGFVDTVSELLNHADPQVRRRSLVIFNDKITALKSQLSAEQIVRFLSLL
DSFSKVIESSQETDTNKQTALLSFEILARNFAQTHSATFLQQMPIIIRAIGHANHQVVSS
SLICVATLCAELQAKIVPYIPQFFPVLLSTLTGSYASSVDSETRALLQLSCVSSIEMMLK
KISKFLSPYLPKLLNALLHPRLTLGASSKLMSQVRRVLSLITRNIEFRLLLPAMTSAYEF
AVVSENDSSIICLFDFVGEISANLSPKDVGLHHRSIFKFYLQGFEFRRRYQAKVSNIDLI
EEHIISSFMTLVLKLNENLFKPIFLKTIEWGIGQLQQQQNQQQTTKKTTNQQSTKQKESS
DSAAVDLDNVIFFYKLMNSLVTNLKTIFVPYMAYFLDNSVYHLTELIVTTPTSTAVDAQS
GSKRKKGSGLVANKSSAQESTQEKLLCLVTSTLQKCMFYDRDRFIDKQRFEVLMPALVGQ
LENQMGSNGGNAPLTADQLDTFAKRIENYLAPCITQLAVTINQDLLWKPLNHAVLLKTRS
PFANVRYGALQVLDTLHKRMGDRLLVFLPETIPFISELLDDSVPQVEKMTQRFIKTIETH
LGSEESISSYL
NT seq
6696 nt
NT seq
+upstream
nt +downstream
nt
atggatcaagatcaacatttacaaaaattacaagaaaagagaaagaatagagagacgaat
ggcagaaagggagccaagtttggaccaaagaaacggtctgaactcgatcgtcaattagag
gttatcaaatacaatgcacgtgtcattggtaatctgaacaaacgtgagacggtattgttt
ggcgatgccaacactgcaggtaccgtagactatgactctatcttggatctcggaaaggaa
ggtctcagagagttgactaaactcgactctcgtttcaaatcgtttgaaaagaacctcttt
gccaacagttcacgtgacgagaatcgtatgatgatgacaaaggatcaaaccaaggtactc
gacgagagtatcgacagtttcttgcgtctcctctctgcctactacctcttgatgccagct
caacaatgtctcgaatggctcattcgtcgttaccgtatcaacgagtttaacctcgaccaa
cttttaatgtgtactcttccataccatcaatcaaatgcttttgctcaattattaagtatt
ttacgttatgagagtgataagaaatggagatttttaattgtatttagacataacaaggtt
actattacaagagattatttggttggattgttacacaagaatgcattctttttggatttg
gtgtgttcgaccattctcaaatacgaaaaaaccaacactctcaacaagacaatgatttca
ttctttacagctttaatggtcgatgccgtttcagttggtactttgaccgatcaatttatt
cgtactgttttaccatgtctaaacttttctcttaaaagtaaaaatttagatttacaactt
ggatcatttatgattcttagtaatattgcatcaaaagttcaattttccaaagatgttttg
gagttattaattcgtaatactttacttaaccatagtacatctattactgcatcatttaca
tttttattggtattattccaaagacaaaactttaaatcattatcaaattcaaaccttgaa
ttattagtttcaattccagcattaaaagaaataatgttagatttacattcacaaaacaaa
tcattggatagaatgattacattgatggtagtttatttatgtgattcatttgatattaat
gaaaatagtagatcattgttggaattgtttgtcaaggatttaccaacaagcgaaaagatt
catcaaattattgtatctagacttttgaatagatatattaataatttccaaaaaatagat
ttacaagacaaccaaaatgaaaatgaaacaactgaagagaaaaaacaatcgtcaactgat
tcttcttctgcttctgttgattcgatggaaattgatgtagaagaaaaggaatctaaaatg
tcagagattattcattttattgaaccaagattggtacaagagattatcaactctaccctt
tcaacaaacatgtcaaaccaacaacaagacaaacaaaaccttgttttatcgttccaagaa
aaggtgtttgcccaaagagtcgtatcttctagctcggccaccacactctatctcaagttg
caatcgccagtcattgaaaaccgtctctctggtcttgccattctcaaggagcagattgaa
aagggtgcttccgatgtcacctcttttgccaatgttcttggggaccgtctctctgacgaa
gacgacaatgtcaccttggcagcctggggtcttcccaacctcgtccaattgtttggaggt
aatggaagtaccttggtcaacgctgccggcgagtgctttgccatgggatctctgtccacc
tcgaccaaggtatttgtcctcgacactttgatcaagatccaaagcacccatccatttggc
caagacacttccaaccgtctctgtcaaattcttttggaaaacttggtgtttggtaacaaa
aaggatcaagatgaaatcaagttgcgtaccaccattctcaagtcattcaatgatattaaa
gaatgttcaccttatttccgtatctcttccactcctacctcacccatcaccagtaaccta
ttactcgtcaaatctctatctgccaacattaccaagcaatcaagtaatcaagataacatc
caattattcaaatccattttcattcaatcatctgaaaattatctttcaaatgataaatta
attattctcttatcaatttcaaattcaatttttaatttaaagagcaaagaggaaaagatt
gaatttacaaatattataattgaatttttaaagatttatttaaaggaatgtttggaagat
tgtaatactgatggtattattgaaaatgatattacattggaacaaatttgtaatgaaatg
acattgtatgaagaggaacaacaagacaatgattactatgtccacgcattgttttattgt
atcgatgttgtgattaacagttttacaccaatcgaatcgtcggaattgtttatcaaggag
cttcaaaacttgaatgctggcatgtcatttaccagtgccaccaccaaatcaaataatgtt
accaatcatctcatccatatcctcatttcattatttaatttattgttcgaatcaatgaca
actctaactcaacactctgataatttagaatctttccttcaacaaattatcaaacgttat
ttaccaaatcatattgttttattaaaattcttatcaatcttttggtctgataaattattt
aattcaacaattcaagaaacagcattatcattatgtaattgtttccttgaatcaaaatca
tttaagaaatattcaatgaatcaatcgattttatgtttattccttttaccattggtatca
agtcatagaaatgttagagaagctgctggacaatgcataaagtctattgaaaagagtgtt
aataacgctgccaacaatactccccaacaaacatcggtcgttacattgtttgaggaggag
aaatcacttttattaatgtctggtaaactttatggaaatttacttggtacattggtagat
tatatgaatgaattggttatggataatactttcatgtgtacattggtaccaagtattatc
atgtctactgacaatagtgaattgaccaaggaacaaagtgactctgtttgctcgtatctc
atcactgttccattgctctatgaaaacaatgccaatcgttcggctctttggagtgcattg
tctaccatcaatgatccaatcttcttgtcgaccctctcaacctacactcacagtctcctc
aaactctacgaacaagaaaacctcacctctgaacaatcgtccattttgaatgtactcttg
cttcaattggttcaagactattcattggaatctaaaaagaataatcatcttgctcttctt
tacaaggttttgtcttattccaatggtattactctggttggtgcaaccgacaatcaaaag
taccgtattctcgatattgtattaccaagattgacatcgacactactcaacgccctccca
accaaggagcaaaccaagattgtcgaggctgtattggaccttttacactcgagtaccgat
attgagtgcagacaattggcagccgaatcattgcattctatcatgattgatagtacttgc
atcctcaccattctctccaacattcaagtttctcaaacttctatcccacgtatcacagcc
atcatggaaaccatcaaagagaatgcatcatcgattaaaaagattgcagtcttgttgaaa
ccaactctttccattctcaaacaattgaatcaagtcaagtcaattggcgccgcatcgacc
gaatattgtaaacaagttttaattacaactatcttgtccatctctgaatcattctttaag
agtgatattgaattgttctcggagctgtttgacatttcaattattctaaagtgtgtagag
tcgtctggtgacttgcaaacacgtaattgtgcgttggcccttttgagccgtgtcgctcat
cacgcacccaaacacttgtttgaagagtttggcaatattttagagatgatcaagtcggcc
ttggtcaagcaagacgcacccacctttagaatcctctgcgggttccttggcggtgtcgtc
ccatcgattgtcaacaacaaagacttgtcatcgtcgagcaagatcaacatcaactctatt
ttcggtctctttttggaacactttaaacaaatttccaacgactattgcgtaccactgttc
ttgaccatgatccaaagtatcgattatcaaaagttggatctcctatttgttcaaatgttg
gtcaagcgtatcaacctcttgcgcaccatcaacgaggttgaatccaagcccaagacagct
gccgaccttgaaaaggaaaagcaaatggaaaaggagcagttgggagactacatccaacag
gccaacccaacctcttcacaacaacaacaactcgaatcattcaacaagtttatcgaacaa
ctttgtgattgcatcccagccgccaagatttcccgtgccctttccgtcttggccaagatc
tctagtctcatctctcttgaaaaggccgagtttatcgaagacaataacgatcttggtttc
aatgacaaggaggtcatctctttactccactctaaaaaggataaccgtttgttgcaaact
atgattttagagtttatcgaagaacgtttgtcaagcaacagttacctcgaaaacttgacc
tttaaatcaaacaaacaagaaaaggaacaaattgaacaatgctaccttaaatcatttgcc
aatttactcattcttttacgtcaaactacagagttttcagaacgtatcaaatcgacaacc
gaccaatcatccaaaggaaaggagaaattccttaaaaagattcttgcatcaattcacaaa
tgtatggacaagttgaatcaattaatgtcggttgatggatttgttgataccgtctcagag
ttgcttaatcatgctgacccacaagtacgtcgtcgttcacttgtcattttcaacgacaag
attactgctctcaagagtcaattgagtgccgagcaaattgtccgtttcctctcactcttg
gatagtttctcaaaggtcatcgagtcgagtcaagaaaccgataccaacaagcaaactgca
cttctcagctttgagattttagcacgaaactttgcccaaactcacagtgccaccttttta
caacaaatgcccattattatccgtgccattggacatgccaaccatcaagtcgtttccagt
tcactcatttgtgttgccaccttgtgtgctgaacttcaagccaagattgtcccatacatt
ccacaattcttcccagtcttgctatctacattgactggcagttatgcatcaagtgttgat
agtgaaacaagagccctcctccaactctcttgtgtctcttcgattgaaatgatgctcaaa
aagattagcaagtttttgtcaccatatctccccaagttgctcaatgcactcttgcatcca
cgtcttacacttggtgcctcgtccaagctcatgtcacaagtacgtcgtgtcctttcactc
attacccgtaatatcgagttccgtcttttgttgccagccatgacatcagcctatgagttt
gccgtcgtctctgagaatgattcctctatcatttgtctctttgactttgtcggtgaaatc
tcggccaatctctcgcccaaggacgtcggtctccaccaccgctccatcttcaagttttac
ctccaaggttttgagtttagacgtcgttaccaagccaaggtctccaacattgacctcatc
gaagaacacatcatcagcagctttatgactttggttctcaaactcaacgaaaaccttttc
aaaccaatctttttaaagactattgaatggggtattggtcaattacaacaacaacaaaat
caacaacaaacaacaaaaaagaccacgaatcaacaatcaacaaaacaaaaagaatcatcg
gacagtgctgctgtcgatttggataatgttatattcttttataaattgatgaattctttg
gtaaccaatttgaaaacaatctttgtaccatacatggcatactttttggataattcagtc
tatcatttgacagagttgattgtcactacacctacctctactgctgtagacgctcaatct
ggtagcaaacgtaagaagggatctggattggttgccaacaaatcatcggctcaagaaagt
actcaagaaaagcttctatgcctcgtcacatctaccctccaaaaatgcatgttttatgat
cgtgaccgtttcattgacaagcaacgttttgaagtattgatgcctgccctcgtcggtcaa
ctcgaaaatcaaatgggatccaatggtggcaatgccccattgaccgccgatcaactcgac
acttttgccaaacgtatcgaaaactatctcgctccatgtatcactcaattggctgtcact
atcaaccaagatctcctctggaaaccattaaaccatgccgttctcctcaagactcgttcc
ccttttgccaacgttcgttatggtgccctccaagtactcgacactctccacaaacgtatg
ggtgacagattattggtctttttaccagaaaccataccctttatctctgaacttttggat
gactcggtaccacaagtagaaaaaatgactcaacgttttattaaaacaattgaaactcat
cttggtagtgaagaatcaattagttcttatttataa
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integrated database retrieval system
