Cavenderia fasciculata (cellular slime mold): DFA_01049
Help
Entry
DFA_01049 CDS
T02668
Symbol
smg1
Name
(RefSeq) protein kinase
KO
K08873
serine/threonine-protein kinase SMG1 [EC:
2.7.11.1
]
Organism
dfa
Cavenderia fasciculata (cellular slime mold)
Pathway
dfa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dfa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
DFA_01049 (smg1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
dfa01001
]
DFA_01049 (smg1)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dfa03019
]
DFA_01049 (smg1)
Enzymes [BR:
dfa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
DFA_01049 (smg1)
Protein kinases [BR:
dfa01001
]
Serine/threonine kinases: Other
PIKK family [OT]
DFA_01049 (smg1)
Messenger RNA biogenesis [BR:
dfa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
DFA_01049 (smg1)
mRNA cycle factors
Common to processing body (P body) and stress granule
DFA_01049 (smg1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PI3_PI4_kinase
SMG1
FATC
HEAT_ATR
CEP104-like_TOG
TRAF3_RING
2-thiour_desulf
Motif
Other DBs
NCBI-GeneID:
14874173
NCBI-ProteinID:
XP_004359024
UniProt:
F4PQK7
LinkDB
All DBs
Position
Unknown
AA seq
1938 aa
AA seq
DB search
MDDIIGSSTNKSSTSTSTSTSTSTTPTTLKKELSPFSEPYIPHSTATLISKSNSASNLGS
VDHHQQQQQQNASSTKRAEIITLDNVEYLFSNRFHPKNNIREAVVSTFNSIIYNLSEEHN
QHHQQQNHNNSNSNSNSNSNNDSNNNNNGEELNTILKDIITIIDNENEYILKLCKDVNNN
NNSNNNHTSNGNDHRHTTTSIKSISPMVKILKRTTTTTNNTATSPPTTTSPSTTTKTVDQ
RPNTLPFEDSESYYQRVILYNLHLLTKIATHVPSQCDSIQTNIFTLYDTCKNILNNNNNN
NNNNNNTSHSSSASTTMINNQIIPTIITCLSQMVVLVKFNGMNQELLRQVIVNEMKQLGT
GASRAALEANLHLLQNLLSKQSVNNNAAVIESSASLIKDIFRKLITLVNVQSTSIQTRLP
SIFQQLVTKQLLDANHCRRVISVALFKLSELKDESVKQSYLDLLPKTASYIDVGYQKNSK
VNDIALPYKLLLMRSQGTIGQPFADFFKRIFEWIYGAGNNMSISKQDITKSLLDQFYCFN
IIHILANENQRLDKKKVESNITTSSVLIWYWAMWECGRYCINNRLKTAFGSGVQTFEIFE
KVILQLIRERKDFGKIKLMLLFMDSLEKQIFSSAYGSVILPGPSSKEILFFKLNSRVSED
WFSRIRTNLLKSSILCSSAPDIIRHATLRINDIRAGRFVDPAHAHYELEFCIIHLANAFQ
QLGEADSLIGLSKWIDQYNQTITTTNLSNSAQMLSMSENIKREQSPQKPQSPQPLPLLSS
PWINGTIQSSKQHFEESILSLTPLISTTNPNKLSDFQEMEQFIQKYKEKIKESNVKMVYK
DSYLKTLSSFAKGDIESSQPFVTECTTDLNKEPNGLIGNLLAVDELILSIMIIQKDQSIN
GGSGSGSSSAQGEVGELIKRSKTLIQDSLDVIGFETNVQAFQYISQLKVIDELENGVNSN
LTSTLNTTLKTKQLPECTNQQPMIGYLERLRRTRNHISQTQHRNDILFYNIPLTEKLIQL
SRKTSNHRFCHRLLNAILESHSPSCFLEKIKLKYHQDKKVEAFQDLLNSIRLFPENISSA
IKTKSYLHLIKYYNANKNNQVFQSYVSNLSPDLTDIESYYKKATLTTPENVKMWSSYGDW
AFEQSQHCSEIEKTKYLKIAIDNYFKYLEYNTDRSTIQTTLKIFNLLVNHGDQLQENFDR
CIKSVSATPFYDIIPQMFARLGHCSKYSQSVIIDILNAISVADPNRIVFSTMVGHQIQQL
LLRQQQQQSQSDNNNNNVKTNSFENYNPQKDYSIGLIKKQLLDKCPTLVQETEVLIKGLE
NITILWDDSWHQLMEQIHVWICMHIKEWNVEYAAMKKAKTPNLNSKLKRKNLSLMQPVLD
KIKRLLSTTLLLQCNTPHEKWFASTHYEIINKVVRCIEKQTKPSNPFVSLQELIQHFALN
RLANLDLYSISPQLYDFHPSQIAMPGLGQSDVRVQSVQPTIYLLPTKTKPKKISFLGSDG
MSYSYLLKGREDLHLDERVMQFQTIVDQLLITDKKCNSLRNLRTRSYAVVPLSQSSGIIQ
WVESAVPLFSLYKNWYRNEITYKSDASQQQQAKEAPRISVRPVDLFYNKLVPLLNERGIS
RVHRSEWPKDVLIKVYNDLVNETPKWLLSRELWYSSCSTSELFLKTQSFSRSLALMSMVG
YVIGLGDRHLDNILIDLKTGEVVHIDYNICFEKGLQLKVPEKVPFRMTQIIEHALGLTGV
NGTFSETCIQVLGLLRKNKHTLLNILETFIYDPLYDWKFKQNEIIAKENEDNVVTDGGVG
GGGGGTSVAAGGGGGDQQKLKGSGTNSVAAANDDDNDEDDSDGSPSSDDDEPSSVAFNME
NMDDTMESDAKQEVVPNKQTNYNENRSIQGLAVANQVRFKLEGTDQKLSVEKQVEMVIKE
AKNIENLSAMYEGWTPFI
NT seq
5817 nt
NT seq
+upstream
nt +downstream
nt
atggatgatattattggtagcagtactaataaatcatccacatccacatccacatcaaca
tcaacatcaacaacaccaacaacattaaagaaagagttatcaccattctctgaaccttat
ataccacattctactgctactctaatatcaaagagtaattcagcttcaaaccttggtagt
gtagatcatcatcaacaacaacaacaacaaaatgcatcgtcaactaaaagagcagagata
ataacattggataatgtagaatacctattctcaaataggttccatccaaagaataatatt
cgtgaagctgttgtatcgacctttaattcaatcatttacaacctttctgaagaacacaat
caacatcatcaacaacaaaaccataataatagtaatagtaatagtaatagtaatagtaat
aatgatagtaataataataataatggagaagaattaaataccattttaaaagatataatt
acaatcattgataatgagaatgaatatattcttaaactatgtaaagatgtaaataataat
aataatagcaataataatcatactagtaacggtaatgatcaccgtcatactacaacatca
atcaaatcaatatcaccaatggtaaagatattaaagagaactaccaccaccacaaataac
acagcaacatcaccaccaacaactacatcaccatcaacaactacaaagacagtcgatcaa
agaccaaatacattaccatttgaagatagtgaatcatattatcaaagagtgatactttat
aatctacatttattgacaaagattgctacacatgtaccatctcaatgtgattctattcaa
accaatatctttacattgtatgatacttgtaagaatattttaaacaataataataataat
aataataataataataatactagtcactcttcatctgcttcaacaacaatgataaataat
caaatcattccaactattattacatgtctttcacaaatggttgttttggttaaattcaat
ggaatgaatcaagaattattgagacaggtgattgttaacgaaatgaaacaacttggaacg
ggagcgagtagagctgccttggaagcaaatctacatcttttacaaaatctattgtcaaag
caatcggtcaacaacaatgccgctgtaattgaatcatcggcatcactgatcaaagacatc
tttagaaaactaattactttggtcaatgtacagagtacatccatccaaacaagactacca
tcaatctttcaacaactggttaccaaacaactcctcgatgcaaatcactgtcgaagagta
atatcagtggcattgtttaaactatcagagttgaaagatgaatctgtcaagcaaagctat
ctcgatcttttaccaaaaactgcttcctatatagatgttggttatcaaaagaattcaaaa
gttaatgatattgctttaccttataaattattattgatgagatcacaaggtaccattgga
caaccatttgcagatttttttaaaagaatatttgaatggatctatggagctggtaataac
atgtcaatatcaaaacaagatattacaaaaagtcttttggatcaattctattgttttaat
attattcatattttagcaaatgagaatcaaagacttgataaaaaaaaagttgaatcaaat
attacaacatcaagtgtattaatttggtattgggccatgtgggaatgtggtagatattgt
attaacaatagattaaagactgcatttggatcaggtgtacagacatttgaaatatttgaa
aaggtcatactccaactgattcgagagagaaaggattttggaaagattaaactgatgctt
ttgtttatggattcactcgaaaaacaaatattttcatcggcctatggatctgtcattcta
cctggtccatcatcaaaggaaatattattttttaaattaaatagtagagttagcgaagat
tggttctcaagaattagaaccaatctattaaaatctagtatattgtgtagttctgcaccc
gatatcattagacatgctacattgagaattaatgatataagagcaggtagatttgttgat
ccagctcatgcacattatgaactagaattttgtattattcatcttgccaatgcattccaa
caattgggtgaagcagattcgctaataggtctatcgaaatggatcgatcaatataatcaa
actataaccactacgaatctttcaaatagtgcacaaatgctatcgatgagcgagaatatc
aaacgtgaacaatcacctcaaaaaccacaatcacctcaaccactaccacttttatcatca
ccatggatcaatggaacgattcaaagttcaaaacaacactttgaagaatctattttatct
cttacacctttaatctctactaccaatccaaataaattatctgattttcaagaaatggaa
caattcattcaaaagtataaagaaaagattaaagaatcaaatgttaaaatggtttacaag
gattcttatttgaaaactttatcatcttttgccaaaggtgatatagaatcttcacaacca
tttgtaactgaatgtactactgatttaaataaggaaccaaatggattgataggaaattta
ttggcagttgatgaattaattttatctattatgattatacaaaaagatcaatcgataaat
ggtggtagtggtagtggtagtagtagtgcacaaggtgaagttggagaattgattaaaaga
tcaaaaacacttattcaagactctttagatgtaattggattcgaaaccaatgttcaagca
ttccaatacatctcacagctaaaagttatcgatgaattagagaatggtgtcaattcaaat
ttgacatccactctaaatactactttgaaaactaaacaattgcctgaatgcacaaatcaa
caaccaatgattggatatttggaaagactacgtcgtactagaaaccacatctcacaaact
caacatcgcaacgatattctattttacaatatccctctgacagagaaattaattcaactc
tctagaaaaacttcgaatcatagattctgtcatcgtctattaaatgccattctagaaagt
cattccccatcttgttttcttgaaaagattaaattaaaataccatcaagataaaaaggtt
gaagcattccaagatttattaaatagtattagacttttcccagagaatattagttctgcc
attaaaacaaaatcctatttacacttgattaaatattataatgccaataagaataatcaa
gttttccaatcctatgtttcaaatttatcaccagacctaactgatattgaatcatattat
aaaaaggcaactttgacaacacctgaaaatgttaaaatgtggagttcatatggtgattgg
gcttttgaacaatcacaacattgtagtgaaattgaaaaaacaaagtatctaaagattgca
atcgacaattatttcaaatacctagagtataatacagatcgatctactatccaaacaaca
ttaaagatattcaacctcttggtgaatcatggcgaccaattgcaagaaaactttgatcga
tgcatcaaatcagtgtcggccacacccttctatgacattattccacagatgtttgccaga
cttggacattgctcaaaatacagtcaatcagtgatcattgatattctcaatgccatctct
gtggccgatccaaatagaattgtcttttctacaatggttggacaccaaatccaacaatta
ctattaagacaacaacaacaacaatcacagtctgataacaataacaacaatgtgaaaaca
aactcttttgaaaattataatccacaaaaagattattcaattgggttgatcaagaaacaa
ttgttggacaagtgtcctacacttgttcaagagactgaagtgttgatcaagggattggag
aatatcaccattctatgggacgatagctggcaccaattgatggaacaaatacacgtttgg
atatgtatgcacatcaaagagtggaatgtggaatatgccgcaatgaaaaaggcaaagact
cctaacctcaactccaagctcaaacgaaagaacctcagtttgatgcaacccgtcttggac
aagatcaagagactcttatcaaccactctgctcctacagtgcaacacacctcacgaaaag
tggtttgcaagcactcactatgagattatcaacaaggtggtgagatgtatcgagaagcag
actaaaccatccaacccattcgtatcgctacaagagttgatccaacactttgcactcaac
cgtctggccaatctcgacctctattcgatcagtccccagctttatgatttccatccatcc
caaatagcaatgcccgggcttggacaaagcgacgtgcgtgtccaatcggtccaaccgacc
atctatctgctgccaaccaagaccaaacctaaaaagatatcgttcctcggtagcgatggt
atgtcctactcttatttgctcaaaggtagggaagatttgcatctcgacgaacgtgtcatg
cagttccagaccattgtcgatcagttattgatcactgacaaaaagtgcaatagtttgcgt
aacctcagaacgcgtagttatgcggtcgtacctctcagccagagctcgggtatcatccag
tgggtggaaagtgccgtaccactattctcactctacaagaattggtatcgtaatgagatc
acctacaagagtgatgccagtcaacaacaacaagcaaaggaagcaccacgtatatctgtc
agacccgtcgatctcttttacaacaagctcgttcctcttctcaacgaacgtggtatttcc
agagtacatagatccgaatggcccaaggatgtattgatcaaagtctacaatgaccttgtc
aacgagaccccaaaatggctgctatcacgtgaattgtggtattccagttgttcaacctct
gaactattcctcaaaacacaatcattctctagatctcttgcattgatgtcaatggttggt
tatgtcattggtctaggtgatagacatttagataatattttaattgatttaaaaactggt
gaagttgttcatattgattataatatttgttttgaaaaaggattacaacttaaagtacct
gaaaaggtaccatttagaatgactcaaatcattgaacatgcattgggattaactggtgta
aatggtacattctctgaaacatgtattcaagttttaggtttattaagaaaaaacaaacat
acattattaaatattttggaaacatttatttatgatccattgtatgattggaaatttaaa
caaaatgaaatcattgcaaaagaaaatgaagataatgttgtgactgatggaggtgtagga
ggaggaggaggaggaacatcagttgcagctggaggaggaggaggagaccaacaaaagtta
aagggatctggaacaaactctgtggctgctgcaaatgatgatgacaatgatgaagatgac
agtgatggatctccatcaagtgatgacgatgaaccatcctctgttgcattcaacatggag
aatatggatgatacaatggaaagtgacgccaaacaagaagttgtaccaaacaagcaaacc
aattacaatgagaatagaagtattcaaggtttggcagttgcaaaccaggttcgattcaaa
ctcgaaggaactgatcaaaaactatcagtcgagaaacaagttgaaatggttatcaaagag
gcaaaaaacattgaaaatctatctgccatgtatgaaggttggactccctttatatag
DBGET
integrated database retrieval system
