KEGG   Cavenderia fasciculata (cellular slime mold): DFA_01139
Entry
DFA_01139         CDS       T02668                                 
Name
(RefSeq) DSS1/SEM1 family protein
  KO
K10881  26 proteasome complex subunit DSS1
Organism
dfa  Cavenderia fasciculata (cellular slime mold)
Pathway
dfa03050  Proteasome
dfa03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:dfa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    DFA_01139
  09124 Replication and repair
   03440 Homologous recombination
    DFA_01139
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dfa03019]
    DFA_01139
   04131 Membrane trafficking [BR:dfa04131]
    DFA_01139
   03051 Proteasome [BR:dfa03051]
    DFA_01139
   03400 DNA repair and recombination proteins [BR:dfa03400]
    DFA_01139
Messenger RNA biogenesis [BR:dfa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX-2 complex
     DFA_01139
Membrane trafficking [BR:dfa04131]
 Exocytosis
  Tethering complex
   Exocyst complex assembly proteins
    DFA_01139
Proteasome [BR:dfa03051]
 Eukaryotic proteasome
  Regulatory particles
   PA700 (19S proteasome)
    non-ATPase subunits
     DFA_01139
DNA repair and recombination proteins [BR:dfa03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     DFA_01139
SSDB
Motif
Pfam: DSS1_SEM1
Other DBs
NCBI-GeneID: 14873478
NCBI-ProteinID: XP_004359110
UniProt: F4PQZ5
LinkDB
Position
Unknown
AA seq 106 aa
MGKGENTSIQTTKPSKKVDTLEDTSKINQPKEENEVIEDDEFEEFEDNLLSLLMFRFDRL
DVTCDDVDTKEQWEDDWDTEHIDDEFSKQLRQEIEAHAANPQPMKM
NT seq 321 nt   +upstreamnt  +downstreamnt
atgggtaaaggagaaaatacatcaattcaaacaacaaagccatctaaaaaggttgatact
ttagaagatacatcaaagattaatcaaccaaaagaagaaaatgaagtcattgaagatgat
gaatttgaagaatttgaagataatctattgtcgttattaatgtttcgtttcgatcgttta
gatgtaacttgtgatgatgtagatacaaaggaacaatgggaagatgattgggatacagaa
catattgatgatgaattttcaaaacaattaagacaagaaattgaagctcatgcagctaat
ccacaaccaatgaaaatgtaa

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