Cavenderia fasciculata (cellular slime mold): DFA_01509
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Entry
DFA_01509 CDS
T02668
Symbol
pwp2
Name
(RefSeq) WD40 repeat-containing protein
KO
K14558
periodic tryptophan protein 2
Organism
dfa
Cavenderia fasciculata (cellular slime mold)
Pathway
dfa03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
dfa00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
DFA_01509 (pwp2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dfa03009
]
DFA_01509 (pwp2)
Ribosome biogenesis [BR:
dfa03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
DFA_01509 (pwp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Utp12
Bromodomain
ANAPC4_WD40
Acetyltransf_1
NBCH_WD40
Acetyltransf_7
Ge1_WD40
Nop14
CDC45
Baculo_11_kDa
MRP-L27
Motif
Other DBs
NCBI-GeneID:
14873556
NCBI-ProteinID:
XP_004359473
UniProt:
F4PT47
LinkDB
All DBs
Position
Unknown
AA seq
1440 aa
AA seq
DB search
MSELGFLNGSGVQLPNSQQDVSIHSTSSAAEHNAAFHVPIVTPVTSQPLLGPDGGIDPSK
LTAKIEKQMGILRFEVITNDGGRNSELLVNLKNVFSKQLPKMPREYIVRLMFDRFHHSLL
IIKRDVVIGGICFRPFKEQGFIEIAFCAITSSEQVKGYGSFLMTHLKEHNKKTGIFHFLT
FADNFAIEYFQKQGFTHEITLPREKWKGFIQEYDGGSLMECVIHINANYLDIPLMVKAQR
DAVDQKIRQISTSHIVYPGLTSFKPGERKIIPIDSIPGIKQSGWDHPDAWPFQRPVNEQE
APNYHSIVKDPVDLQTISGRLSSGAYYITKYMFQADLKRMCENCRVYNGEGTQYYEIANR
LEKYIVGQSYGKFPKIDKKCTVYNKGNIVFTPDGNTLISPVGNRVTLFDLVNNSSVTLPV
ETNRDIDIIAISPTGKILIVSDEAGLTYIINLQRHVCLGTVKFHKTPSCIQFSPNNSLIA
FSVERRVYFYSSPKLEKVVKPITRLSVITFQSIINHVGWSPCSTKVVVSLSDGNIAICKK
KKGSQAILRTQGRVPKSAHFSQDGKKIIVFTKTDTMEFNLKEIISKKQRKQQQQLLNNEN
GLSTTKMQVEDEKDEQNEEEDEDMQEDDVEDAQSDDEEEDEEEEEEEEEMEKEMEDSEEE
LASEDEDEQQQQQVKKTSIKKEPVVRQFWRRGKRVPTGPVKATAFGFHPFSGLAVVGQKG
KFILIDTNNELKRAMTMNLSGTSITSIAINPSGEWIAIGSADLGQLFVWEWKSETFILKQ
QGHAYNMNTIAYSPDGQIIATGGDDCKVKAWNTNSGFCYVTFADHEAPVSVVKFSPVSSQ
MVLFSASLDGSVRAYDMIRYRNFRTFVSPNKTQFSSLAIDSTGDIVVAGSVDSFEIYVWS
IKTGKLTDILSGHTSPVYGLSFNPVNNILASASWDKTVRLWDIFNDAQMLESLEHTSDVL
TCSFSPDGKRFASASLDGNIQIFETENWTQIGFINGKNEIMGGRSAKDVVQKNPSGRTFT
KLVFTPNGSCLIAGGDSKYICIYHVEQQILLKRYQTTYNLSIDGMLDYFKSNNLSEFGFH
LDTLDGDYAEDEERRTKYLPGAQKGDLSKRSTLRKIKTYALDVSPTGRAWSAVTTDGIVI
YSLDDTLFFDPTDLTIDITPETIKQTLLEKQYLKSLVMSLKLNEKKLIEEVYQSIPHDEI
EFVCHEFPVYHIKSLIHFISFNYDKQPHIELQMRWILCLFFYHGKYIKTNYLAIIEPLRN
LQKLAVQKYNDLSKVCDENQYTLEYFEKLSNLMNINQQQTQKQSNGNGVHHDDEEEEEEE
QEEEEVSSSNHPTNLTTETTPQTTLEQSTYWMVTMHTNKQTNQAQHHQSNNQSNHNNSLL
PEFLIIITPFLNPFIHPSILFNGCLSNATQQQQQQQQQQQQQQQQQQQRQRQQHHLQHNE
NT seq
4323 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagttaggttttttaaatggtagtggagttcaattaccaaactcacaacaagat
gtatctattcattcaacgagtagtgctgctgaacacaatgctgcatttcatgtccctata
gtaacacctgtaacatcacaaccattattgggtcctgatggaggaatagatccaagtaaa
ttaacagcaaaaatagagaaacaaatgggtatattaagatttgaagtgattacaaatgat
ggaggaagaaattcagagttattggtcaatttgaagaatgtcttttcaaaacaacttccc
aagatgccaagagaatatatagtgcgattgatgtttgatcgattccatcattcgctgttg
atcatcaagcgtgatgtcgttattggtggcatttgcttccgtccctttaaagagcaaggg
tttatagagattgcattctgtgccatcacatcgagcgagcaagtcaagggttacggttca
ttcttgatgacgcatctcaaagaacacaacaaaaagactggcatctttcactttctcacc
tttgccgataactttgccatagagtatttccagaaacaaggatttacacacgagattacc
ctaccacgcgaaaagtggaaagggttcattcaagagtacgatggaggtagtttgatggaa
tgtgtcattcacatcaatgcaaactatctcgatattcctttgatggtcaaggcacaaaga
gacgctgtcgaccaaaagatacgacagatttcaacgtctcacattgtgtaccccggtctg
acaagtttcaagccgggtgaacgcaagattatccctatcgactcgataccaggtatcaag
cagtctggttgggaccatccagacgcatggccgttccaaagaccggtcaacgagcaagaa
gcacccaactaccactcgatcgtcaaggatccagtcgatttacagaccattagtggacgg
ttgtcgtctggcgcctactatatcaccaaatacatgttccaagcagacctaaagagaatg
tgcgaaaattgtagagtttataatggagaaggtactcaatactatgaaattgcaaatcgt
ctagagaaatatattgtcggacaatcttacggtaaatttccaaaaattgacaagaaatgt
acagtctataacaagggaaatatagtattcacacccgatggaaacactcttatcagtccg
gtaggcaacagagtcactctattcgatcttgtaaataattcatctgtcactcttcccgtc
gaaacaaatagagatatcgacattattgcaatatcaccaactggaaagattctcattgta
tctgatgaagctggtttaacatatatcattaatttacagagacatgtttgtcttggtact
gtcaagtttcacaagacaccatcttgtattcaattctcaccaaataatagtttgattgca
ttttcagttgaaagaagagtatacttttatagttcaccaaaacttgaaaaggttgttaaa
ccaatcactcgtttatctgttattaccttccaaagcataatcaatcatgttggatggtca
ccttgttcaaccaaggtagttgtttcactcagcgatggtaatattgccatctgcaaaaag
aaaaagggtagtcaagccatcttgagaacacaaggtcgtgttccaaagtcggctcacttt
agtcaagatggaaagaagattattgtattcacaaagactgatactatggaattcaatctc
aaagaaatcatctcaaagaaacaaagaaaacaacaacaacaattattaaataatgaaaat
ggtttatcaacaacaaagatgcaagttgaagatgaaaaagatgaacaaaatgaagaagag
gatgaagacatgcaagaagatgatgttgaagatgctcaaagtgacgatgaagaagaagat
gaagaggaggaagaagaagaagaagagatggaaaaggaaatggaagattctgaagaagaa
cttgcatcagaggatgaagatgaacaacaacaacaacaagttaaaaagactagtattaaa
aaagaaccagttgttagacaattttggagaagaggaaagagagttccaacaggaccagtt
aaagctactgcttttggattccatccattctctggattggcagttgttggtcaaaagggt
aagttcatcctcatcgacaccaacaatgagttaaagagagccatgacgatgaatctctcg
ggtacgtcgatcacctcgattgccatcaatccaagtggagagtggatcgctattggcagt
gccgatcttggccaactgtttgtgtgggagtggaagtcagagacatttatcctcaagcaa
caaggacacgcctacaacatgaacaccattgcttactcgcccgacggacagatcattgcc
actggtggcgacgactgcaaggtcaaggcatggaacaccaactctggattctgctacgtc
acctttgccgaccacgaagcacctgtatcggtggtcaagttctcacccgtctcatcacaa
atggtgttgttctcggccagtttagatggtagtgttagagcatacgatatgatccgttac
cgtaacttccgtacctttgtgtcgccaaacaagacacaattctcgtcgttggcaattgac
tcgaccggagacattgtcgttgcaggttcggtcgactcttttgaaatctatgtgtggtca
atcaagactggcaagttgactgatatcttgtcgggccatacttcacccgtttacggcctc
tcgttcaaccccgtcaacaatatcctcgcatctgcatcgtgggacaagacagtccgtctt
tgggacatctttaacgacgctcaaatgctcgaatcgctcgaacacacctctgacgtcctc
acatgctcattcagccccgacggcaagcgattcgcatcggcatcactcgacggaaacatc
caaatctttgaaactgaaaactggacacaaatcggattcatcaatggaaagaatgagatc
atgggtggcagaagtgccaaggatgtcgtgcaaaagaacccaagcggacgtacctttacc
aagttggtattcactcccaacggcagctgcttgattgctggtggtgactccaagtacatc
tgcatctaccacgtcgaacaacaaatcctgttgaagcgttaccaaaccacctacaatctt
tcgatcgacggtatgttggactactttaagagcaacaacttgtccgagtttgggttccat
ctcgacactcttgacggtgactatgccgaggacgaagagcgtcgcaccaaatacctccca
ggtgcccaaaagggtgacctctccaagcgctccactctcagaaaaatcaaaacctatgcc
ctcgacgtctcaccaaccggtcgtgcctggtctgctgtcaccaccgatggtattgtcatc
tattccctcgacgatactctcttctttgatccaaccgatcttactatcgacatcacccca
gaaacaatcaaacaaactttattagaaaaacaatatcttaaatctttagttatgagtctc
aaattaaatgaaaagaaattaattgaagaagtatatcaaagtattccacatgatgaaatt
gaatttgtatgccatgaattcccagtctatcatatcaagagtcttattcatttcatcagt
ttcaattatgacaaacaaccacatatcgaacttcaaatgagatggatcctatgtctattc
ttttaccatggaaaatatataaagacaaactatcttgccatcattgaaccattacgtaat
cttcaaaaattggctgtccaaaaatataatgatttatcaaaggtatgtgatgaaaatcaa
tacactttagagtactttgagaaattatcaaatttgatgaatattaaccaacaacaaaca
caaaaacaatcaaatggaaatggagttcaccatgatgatgaagaagaagaagaagaggaa
caagaagaagaagaagtttcctcatccaaccatccaactaacctaaccaccgaaacaact
ccccaaacaacattggaacaaagtacatattggatggtgaccatgcatacaaacaaacaa
acaaaccaagcacaacatcatcaatcaaacaatcaatcaaatcataataattcactgtta
cccgagtttttaatcatcattactccattcttaaatccattcattcatccatccatatta
tttaacggctgtttaagcaacgcaactcaacaacaacaacaacaacaacaacaacaacaa
caacaacaacaacaacaacaacaacgacaaagacaacaacatcatctacaacacaacgaa
taa
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